RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 DDOQ99489 341 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 ALG12Q9BV10 488 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 ULBP2Q9BZM5 246 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 GPR35Q9HC97 309 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 KCNJ16Q9NPI9 418 aa17.63■□□□□ 0.41
SHKBP1-222ENST00000600320 SLC22A23A1A5C7 686 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 PRSS37A4D1T9 235 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 OR6C65A6NJZ3 312 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 ZAR1LA6NP61 321 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 CENPBD1B2RD01 187 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 KRT33AO76009 404 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 SNAP29O95721 258 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 QDPRP09417 244 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 COX5AP20674 150 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 NOS3P29474 1203 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 RAD23AP54725 363 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 CD47Q08722 323 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 SLX4IPQ5VYV7 408 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 CXorf67Q86X51 503 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 SDR9C7Q8NEX9 313 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 RNASE6Q93091 150 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 MCHR2Q969V1 340 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 NMNAT3Q96T66 252 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 TOR3AQ9H497 397 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 ASB6Q9NWX5 421 aa17.62■□□□□ 0.41
SHKBP1-222ENST00000600320 ZNF587BE7ETH6 402 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 E9PQ18 207 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 XKRYO14609 159 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 CCKARP32238 428 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 CD79BP40259 229 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 ZNF133P52736 654 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 CEACAM16Q2WEN9 425 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 LEG1Q6P5S2 330 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 SLC25A47Q6Q0C1 308 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 JAZF1Q86VZ6 243 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 PACRGLQ8N7B6 248 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 SLC37A3Q8NCC5 494 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 NPEPL1Q8NDH3 523 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 SYT4Q9H2B2 425 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 FN3KQ9H479 309 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 CRLF2Q9HC73 371 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 NPDC1Q9NQX5 325 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 ELOVL5Q9NYP7 299 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 VSX1Q9NZR4 365 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 ENOPH1Q9UHY7 261 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 ORC6Q9Y5N6 252 aa17.61■□□□□ 0.41
SHKBP1-222ENST00000600320 CACNA1CQ13936 2221 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 RPL36A-HNRNPH2H7BZ11 118 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 C19orf84I3L1E1 186 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 LYZL6O75951 148 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 MPGP29372 298 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 CRMP1Q14194 572 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 ETFDHQ16134 617 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 FBXW10Q5XX13 1052 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 C12orf73Q69YU5 71 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 STAC2Q6ZMT1 411 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 ADCK1Q86TW2 530 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 ZNF433Q8N7K0 673 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 CYB561A3Q8NBI2 242 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 SNX18Q96RF0 628 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 GRIP2Q9C0E4 1043 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 B3GAT2Q9NPZ5 323 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 C8orf4Q9NR00 106 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 CMC2Q9NRP2 79 aa17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 SMPD3Q9NY59 655 aaPredicted RBP17.6■□□□□ 0.41
SHKBP1-222ENST00000600320 OR6C68A6NDL8 312 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 M0R129 80 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 SURF4O15260 269 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 DHHO43323 396 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 SEC14L2O76054 403 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 CTLA4P16410 223 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 CDH2P19022 906 aaPredicted RBP17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 ARF1P84077 181 aaKnown RBP17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 ITGADQ13349 1161 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 P2RY6Q15077 328 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 SFRP5Q5T4F7 317 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 NSMAFQ92636 917 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 TSSK2Q96PF2 358 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 RBP7Q96R05 134 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 TAS2R16Q9NYV7 291 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 TVP23BQ9NYZ1 205 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 KLHL21Q9UJP4 597 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 UGT2A1Q9Y4X1 527 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 HCFC1P51610 2035 aa17.59■□□□□ 0.41
SHKBP1-222ENST00000600320 DCTN6O00399 190 aa17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 AHCYL1O43865 530 aa17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 RAD51DO75771 328 aa17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 RENP00797 406 aa17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 HMGN1P05114 100 aa17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 PSMB1P20618 241 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 SNTB1Q13884 538 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 THEM4Q5T1C6 240 aa17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 C10orf128Q5T292 105 aa17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 ABHD12BQ7Z5M8 362 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 HTRA1Q92743 480 aa17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 NUAK2Q9H093 628 aa17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 NELFAQ9H3P2 528 aa17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 RPRD1BQ9NQG5 326 aaKnown RBP17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 GPR52Q9Y2T5 361 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms