RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 CARTPTQ16568 116 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 FXNQ16595 210 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 IQCCQ4KMZ1 466 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 DEF8Q6ZN54 512 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 CXXC5Q7LFL8 322 aaKnown RBP13.63□□□□□ -0.23
VRK3-221ENST00000600284 ZNF786Q8N393 782 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 SPATA3Q8NHX4 192 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 TMEM239Q8WW34 195 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 SGTBQ96EQ0 304 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 SEPHS2Q99611 448 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 MRPL13Q9BYD1 178 aaKnown RBP13.63□□□□□ -0.23
VRK3-221ENST00000600284 MS4A5Q9H3V2 200 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 C1orf198Q9H425 327 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 TMEM38BQ9NVV0 291 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 CAPN7Q9Y6W3 813 aa13.63□□□□□ -0.23
VRK3-221ENST00000600284 SLC22A23A1A5C7 686 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 NPIPB13A6NJU9 1138 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 NPIPB4C9JG80 1138 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 SYNGR3O43761 229 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 LMX1BO60663 402 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 PTHP01270 115 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 APEHP13798 732 aaKnown RBP13.62□□□□□ -0.23
VRK3-221ENST00000600284 DAOP14920 347 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 ZNF23P17027 643 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 IFNA8P32881 189 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 DAP3P51398 398 aaKnown RBP13.62□□□□□ -0.23
VRK3-221ENST00000600284 ZNF84P51523 738 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 UGT2B15P54855 530 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 CLRN1P58418 232 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 SELENOWP63302 87 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 RPL18Q07020 188 aaKnown RBP13.62□□□□□ -0.23
VRK3-221ENST00000600284 RAB39AQ14964 217 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 CYBRD1Q53TN4 286 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 GKAP1Q5VSY0 366 aaPredicted RBP13.62□□□□□ -0.23
VRK3-221ENST00000600284 FAM166AQ6J272 317 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 CDK20Q8IZL9 346 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 OR2T12Q8NG77 320 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 PFN4Q8NHR9 129 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 RP9Q8TA86 221 aaKnown RBP13.62□□□□□ -0.23
VRK3-221ENST00000600284 UBASH3BQ8TF42 649 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 TMEM255BQ8WV15 326 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 MCHR2Q969V1 340 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 BEX2Q9BXY8 128 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 MRPL37Q9BZE1 423 aaKnown RBP13.62□□□□□ -0.23
VRK3-221ENST00000600284 BPESC1Q9GZL8 116 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 INIPQ9NRY2 104 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 SLC7A8Q9UHI5 535 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 MED31Q9Y3C7 131 aa13.62□□□□□ -0.23
VRK3-221ENST00000600284 IGHV4-61A0A0C4DH41 118 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 ELOVL7A1L3X0 281 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 SH3PXD2BA1X283 911 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 MCIDASD6RGH6 385 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 F13BP05160 661 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 IGFBP1P08833 259 aaPredicted RBP13.61□□□□□ -0.23
VRK3-221ENST00000600284 ADRA2AP08913 450 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 TACSTD2P09758 323 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 ACADSP16219 412 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 ZNF16P17020 682 aaPredicted RBP13.61□□□□□ -0.23
VRK3-221ENST00000600284 TNFRSF1BP20333 461 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 OR1E2P47887 323 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 ZNF133P52736 654 aaPredicted RBP13.61□□□□□ -0.23
VRK3-221ENST00000600284 ST3GAL3Q11203 375 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 TAF11Q15544 211 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 SLC36A2Q495M3 483 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 TMEM53Q6P2H8 277 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 ARPINQ7Z6K5 226 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 ZNF584Q8IVC4 421 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 MICU2Q8IYU8 434 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 ZCCHC24Q8N2G6 241 aaKnown RBP13.61□□□□□ -0.23
VRK3-221ENST00000600284 NOXO1Q8NFA2 376 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 FGFBP3Q8TAT2 258 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 ASB10Q8WXI3 467 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 LZICQ8WZA0 190 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 SH3GL3Q99963 347 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 SHARPINQ9H0F6 387 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 REV1Q9UBZ9 1251 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 KCNS2Q9ULS6 477 aa13.61□□□□□ -0.23
VRK3-221ENST00000600284 LOC100289279A0A1B0GTE1 492 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 M0R233 179 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 TRMUO75648 421 aaKnown RBP13.6□□□□□ -0.23
VRK3-221ENST00000600284 PATE4P0C8F1 98 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 NR2C1P13056 603 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 THBS2P35442 1172 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 AQP2P41181 271 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 GUCY1A3Q02108 690 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 MSMPQ1L6U9 139 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 LRRC23Q53EV4 343 aaPredicted RBP13.6□□□□□ -0.23
VRK3-221ENST00000600284 HSP90B2PQ58FF3 399 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 C10orf128Q5T292 105 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 UGT2A3Q6UWM9 527 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 SLC16A14Q7RTX9 510 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 OR4K5Q8NGD3 323 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 OR1J2Q8NGS2 313 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 HPS1Q92902 700 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 MSI2Q96DH6 328 aaKnown RBP13.6□□□□□ -0.23
VRK3-221ENST00000600284 PRRC1Q96M27 445 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 ZNF347Q96SE7 839 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 RNF121Q9H920 327 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 SMURF2Q9HAU4 748 aa13.6□□□□□ -0.23
VRK3-221ENST00000600284 C20orf141Q9NUB4 165 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms