RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 MMP26Q9NRE1 261 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 SDR39U1Q9NRG7 319 aaPredicted RBP5.18□□□□□ -1.58
VRK3-220ENST00000600259 TMEM38BQ9NVV0 291 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 THUMPD1Q9NXG2 353 aaKnown RBP5.18□□□□□ -1.58
VRK3-220ENST00000600259 TAS2R5Q9NYW4 299 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 SLC25A37Q9NYZ2 338 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 GLTPQ9NZD2 209 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 ZNF69Q9UC07 566 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 POLR3KQ9Y2Y1 108 aaPredicted RBP5.18□□□□□ -1.58
VRK3-220ENST00000600259 PPIAL4AQ9Y536 164 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 GMEB1Q9Y692 573 aa5.18□□□□□ -1.58
VRK3-220ENST00000600259 A0A1W2PPW3 197 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 SLC22A23A1A5C7 686 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 ZNF726A6NNF4 738 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 POM121CA8CG34 1229 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 CLIC1O00299 241 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 TM9SF1O15321 606 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 HDAC3O15379 428 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 DHHO43323 396 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 SNNO75324 88 aaPredicted RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 SLC22A3O75751 556 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 RAB36O95755 333 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 IGHV1-46P01743 117 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 THY1P04216 161 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 ADH4P08319 380 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 OR8G3PP0DMU2 310 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 NQO1P15559 274 aaKnown RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 MAKP20794 623 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 FPR2P25090 351 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 GTF2E2P29084 291 aaKnown RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 RBMXP38159 391 aaKnown RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 CSNK1A1P48729 337 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 ZNF133P52736 654 aaPredicted RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 CDH12P55289 794 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 BIDP55957 195 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 WDR4P57081 412 aaKnown RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 KLF3P57682 345 aaPredicted RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 VSNL1P62760 191 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 GALK2Q01415 458 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 TEKQ02763 1124 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 PMS2P3Q13401 168 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 HIST3H3Q16695 136 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 TSTQ16762 297 aaKnown RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 NKPD1Q17RQ9 610 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 TMEM154Q6P9G4 183 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 MSANTD1Q6ZTZ1 278 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 MAVSQ7Z434 540 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 TSPYL5Q86VY4 417 aaPredicted RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 FUNDC1Q8IVP5 155 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 BPIFB2Q8N4F0 458 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 CPEB3Q8NE35 698 aaKnown RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 SLC30A7Q8NEW0 376 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 OR9I1Q8NGQ6 314 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 OR6N1Q8NGY5 312 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 BBS10Q8TAM1 723 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 AENQ8WTP8 325 aaKnown RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 C11orf40Q8WZ69 217 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 RAB39BQ96DA2 213 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 MARS2Q96GW9 593 aaKnown RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 ITCHQ96J02 903 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 DUX5Q96PT3 197 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 SEPHS2Q99611 448 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 TMEM43Q9BTV4 400 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 MRPL13Q9BYD1 178 aaKnown RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 SLITRK2Q9H156 845 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 UNKLQ9H9P5 680 aaKnown RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 B3GAT2Q9NPZ5 323 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 DDX28Q9NUL7 540 aaKnown RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 DCAF16Q9NXF7 216 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 SLCO1C1Q9NYB5 712 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 ZIM2Q9NZV7 527 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 SLAMF8Q9P0V8 285 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 RPS6KB2Q9UBS0 482 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 FBXL3Q9UKT7 428 aa5.17□□□□□ -1.58
VRK3-220ENST00000600259 SOX21Q9Y651 276 aaPredicted RBP5.17□□□□□ -1.58
VRK3-220ENST00000600259 LOC100509620A0A075B734 347 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 TRBV5-3A0A0A0MS03 114 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 DNAJC9-AS1A6NH13 148 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 ZSCAN5BA6NJL1 495 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 CLDN25C9JDP6 229 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 CLDN34H7C241 214 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 MGRN1O60291 552 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 IGHV2-70P01814 119 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 LCKP06239 509 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 RNASE1P07998 156 aaKnown RBP5.16□□□□□ -1.58
VRK3-220ENST00000600259 QDPRP09417 244 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 PGA4P0DJD7 388 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 PGA3P0DJD8 388 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 ADORA3P0DMS8 318 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 IDO1P14902 403 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 ZNF12P17014 697 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 MPV17P39210 176 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 WNT5AP41221 380 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 RAD52P43351 418 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 SLC6A9P48067 706 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 POLR2JP52435 117 aaKnown RBP5.16□□□□□ -1.58
VRK3-220ENST00000600259 SELENOVP59797 346 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 LCN2P80188 198 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 PAX2Q02962 417 aa5.16□□□□□ -1.58
VRK3-220ENST00000600259 RBBP4Q09028 425 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms