RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SLC29A1Q99808 456 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 RBM4BQ9BQ04 359 aaKnown RBP16.6■□□□□ 0.25
CCDC9-205ENST00000600117 C9orf16Q9BUW7 83 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 IFT27Q9BW83 186 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 RBM4Q9BWF3 364 aaKnown RBP16.6■□□□□ 0.25
CCDC9-205ENST00000600117 RBM24Q9BX46 236 aaKnown RBP16.6■□□□□ 0.25
CCDC9-205ENST00000600117 TSSK6Q9BXA6 273 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 KRT84Q9NSB2 600 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 GALNT8Q9NY28 637 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 HCFC1P51610 2035 aa16.6■□□□□ 0.25
CCDC9-205ENST00000600117 TEX13CA0A0J9YWL9 993 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 CENPBD1B2RD01 187 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 SOCS2O14508 198 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 IMPA2O14732 288 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 MGRN1O60291 552 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 ALPLP05186 524 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 SDHAP31040 664 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 ACVR1BP36896 505 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 CSNK1A1P48729 337 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 RPS6KA3P51812 740 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 FAPQ12884 760 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 HIST3H3Q16695 136 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 NOXO1Q8NFA2 376 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 RNASE6Q93091 150 aaKnown RBP16.59■□□□□ 0.25
CCDC9-205ENST00000600117 ZNF566Q969W8 418 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 RASD2Q96D21 266 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 NMD3Q96D46 503 aaKnown RBP16.59■□□□□ 0.25
CCDC9-205ENST00000600117 ZNF570Q96NI8 536 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 ERMAPQ96PL5 475 aaPredicted RBP16.59■□□□□ 0.25
CCDC9-205ENST00000600117 ALKBH3Q96Q83 286 aaPredicted RBP16.59■□□□□ 0.25
CCDC9-205ENST00000600117 KCNK17Q96T54 332 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 RNPEPL1Q9HAU8 725 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 GRHPRQ9UBQ7 328 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 RRP15Q9Y3B9 282 aaKnown RBP16.59■□□□□ 0.25
CCDC9-205ENST00000600117 JMJD1CQ15652 2540 aa16.59■□□□□ 0.25
CCDC9-205ENST00000600117 A6NIZ1 184 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 H3BN98 237 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 RPL36A-HNRNPH2H7BZ11 118 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 CASQ2O14958 399 aaPredicted RBP16.58■□□□□ 0.24
CCDC9-205ENST00000600117 IDH3BO43837 385 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 IGHG1P01857 330 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 COX5AP20674 150 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 IGHV1-2P23083 117 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 IGFBP5P24593 272 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 CD79BP40259 229 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 PCYT1AP49585 367 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 ALDH3A2P51648 485 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 RAP1BP61224 184 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 RAP1AP62834 184 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 KRR1Q13601 381 aaKnown RBP16.58■□□□□ 0.24
CCDC9-205ENST00000600117 UBE2J2Q8N2K1 259 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 LNX2Q8N448 690 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 TEX47Q8TBZ9 253 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 NPDC1Q9NQX5 325 aaPredicted RBP16.58■□□□□ 0.24
CCDC9-205ENST00000600117 ASB6Q9NWX5 421 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 ELOVL5Q9NYP7 299 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 GLTPQ9NZD2 209 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 UPB1Q9UBR1 384 aa16.58■□□□□ 0.24
CCDC9-205ENST00000600117 M0R3G1 203 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 ITGA5P08648 1049 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 POU1F1P28069 291 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 CCKARP32238 428 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 ZNF133P52736 654 aaPredicted RBP16.57■□□□□ 0.24
CCDC9-205ENST00000600117 CRISP1P54107 249 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 ROR2Q01974 943 aaKnown RBP16.57■□□□□ 0.24
CCDC9-205ENST00000600117 FAM27E3Q08E93 113 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 P2RY6Q15077 328 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 TRIP10Q15642 601 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 PGGHGQ32M88 737 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 ZNF362Q5T0B9 420 aaPredicted RBP16.57■□□□□ 0.24
CCDC9-205ENST00000600117 LRFN4Q6PJG9 635 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 STAC2Q6ZMT1 411 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 PTCHD4Q6ZW05 846 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 CXorf67Q86X51 503 aaPredicted RBP16.57■□□□□ 0.24
CCDC9-205ENST00000600117 GPR137CQ8N3F9 429 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 IQCF1Q8N6M8 205 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 SYT14Q8NB59 555 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 OR2T33Q8NG76 320 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 OR6N1Q8NGY5 312 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 EME1Q96AY2 570 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 ZNF837Q96EG3 531 aaPredicted RBP16.57■□□□□ 0.24
CCDC9-205ENST00000600117 ALG12Q9BV10 488 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 SLC25A19Q9HC21 320 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 GPR35Q9HC97 309 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 BAIAP2Q9UQB8 552 aa16.57■□□□□ 0.24
CCDC9-205ENST00000600117 H7C1C5 153 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 ARHGEF9O43307 516 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 HIST1H1CP16403 213 aaKnown RBP16.56■□□□□ 0.24
CCDC9-205ENST00000600117 PSMB1P20618 241 aaKnown RBP16.56■□□□□ 0.24
CCDC9-205ENST00000600117 PEX2P28328 305 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 EPHA2P29317 976 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 MPGP29372 298 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 CDKN2AP42771 156 aaKnown RBP16.56■□□□□ 0.24
CCDC9-205ENST00000600117 GIPRP48546 466 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 CLRN1P58418 232 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 LCN6P62502 163 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 ESRRGP62508 458 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 CDK5Q00535 292 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 SLC34A1Q06495 639 aa16.56■□□□□ 0.24
CCDC9-205ENST00000600117 ITGADQ13349 1161 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms