RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 KRT8P05787 483 aa12.99□□□□□ -0.33
VRK3-217ENST00000599538 SRMP19623 302 aa12.99□□□□□ -0.33
VRK3-217ENST00000599538 ZNF41P51814 821 aaPredicted RBP12.99□□□□□ -0.33
VRK3-217ENST00000599538 ALKBH1Q13686 389 aaKnown RBP12.99□□□□□ -0.33
VRK3-217ENST00000599538 HSD17B12Q53GQ0 312 aa12.99□□□□□ -0.33
VRK3-217ENST00000599538 DBX2Q6ZNG2 339 aa12.99□□□□□ -0.33
VRK3-217ENST00000599538 ESPNLQ6ZVH7 1005 aa12.99□□□□□ -0.33
VRK3-217ENST00000599538 H1FNTQ75WM6 255 aaPredicted RBP12.99□□□□□ -0.33
VRK3-217ENST00000599538 MDGA2Q7Z553 956 aa12.99□□□□□ -0.33
VRK3-217ENST00000599538 GLCCI1Q86VQ1 547 aa12.99□□□□□ -0.33
VRK3-217ENST00000599538 OR11G2Q8NGC1 345 aa12.99□□□□□ -0.33
VRK3-217ENST00000599538 OR51A4Q8NGJ6 313 aa12.99□□□□□ -0.33
VRK3-217ENST00000599538 PPP1R14AQ96A00 147 aa12.99□□□□□ -0.33
VRK3-217ENST00000599538 MRPL48Q96GC5 212 aaKnown RBP12.99□□□□□ -0.33
VRK3-217ENST00000599538 DERL3Q96Q80 235 aa12.99□□□□□ -0.33
VRK3-217ENST00000599538 UBL7Q96S82 380 aaPredicted RBP12.99□□□□□ -0.33
VRK3-217ENST00000599538 COA3Q9Y2R0 106 aaPredicted RBP12.99□□□□□ -0.33
VRK3-217ENST00000599538 TTC28Q96AY4 2481 aa12.99□□□□□ -0.33
VRK3-217ENST00000599538 IGLV3-32A0A0A0MS00 114 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 A0A1W2PNR3 127 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 LIPT2A6NK58 231 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 C9J4A7 227 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 TFECO14948 347 aaPredicted RBP12.98□□□□□ -0.33
VRK3-217ENST00000599538 FLRT2O43155 660 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 LANCL1O43813 399 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 ARL6IP5O75915 188 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 SOX2P48431 317 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 POU3F1Q03052 451 aaPredicted RBP12.98□□□□□ -0.33
VRK3-217ENST00000599538 TLE3Q04726 772 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 METAP1DQ6UB28 335 aaPredicted RBP12.98□□□□□ -0.33
VRK3-217ENST00000599538 C5orf46Q6UWT4 87 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 TRILQ7L0X0 811 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 FAM220AQ7Z4H9 259 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 LRRC28Q86X40 367 aaPredicted RBP12.98□□□□□ -0.33
VRK3-217ENST00000599538 PRSS35Q8N3Z0 413 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 OR2Y1Q8NGV0 311 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 OR2G2Q8NGZ5 317 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 KCTD12Q96CX2 325 aaKnown RBP12.98□□□□□ -0.33
VRK3-217ENST00000599538 EMC6Q9BV81 110 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 ZNF700Q9H0M5 742 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 NOTOA8MTQ0 251 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 G3V3Y1 287 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 ZNF208O43345 1280 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 SPARCP09486 303 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 TACSTD2P09758 323 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 KLK2P20151 261 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 KIR2DL3P43628 341 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 TPTEP56180 551 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 MYBPHQ13203 477 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 SELENBP1Q13228 472 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 RIN1Q13671 783 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 SLC25A53Q5H9E4 307 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 STPG1Q5TH74 334 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 PAMR1Q6UXH9 720 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 KCTD20Q7Z5Y7 419 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 OR5AK2Q8NH90 309 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 ASB10Q8WXI3 467 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 NSMAFQ92636 917 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 DDIT4LQ96D03 193 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 C5orf34Q96MH7 638 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 ABHD1Q96SE0 405 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 ZCCHC4Q9H5U6 513 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 ZNF160Q9HCG1 818 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 CHST11Q9NPF2 352 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 AHCTF1Q8WYP5 2266 aa12.98□□□□□ -0.33
VRK3-217ENST00000599538 OR4C45A6NMZ5 311 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 ZNF814B7Z6K7 855 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 TRIM3O75382 744 aaPredicted RBP12.97□□□□□ -0.33
VRK3-217ENST00000599538 HLA-DQB1P01920 261 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 GP1BAP07359 652 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 CYC1P08574 325 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 NPR2P20594 1047 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 KIR3DL2P43630 455 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 ADAM8P78325 824 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 ZP4Q12836 540 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 ANGPT1Q15389 498 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 YIF1BQ5BJH7 314 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 OR6S1Q8NH40 331 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 MRGPRX4Q96LA9 322 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 CDCP1Q9H5V8 836 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 ELOVL3Q9HB03 270 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 B3GAT1Q9P2W7 334 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 RAD1O60671 282 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 FZD7O75084 574 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 STK17BO94768 372 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 PNPP00491 289 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 ADRB1P08588 477 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 CCL3P10147 92 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 MSX1P28360 303 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 HSF1Q00613 529 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 EGR3Q06889 387 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 HES5Q5TA89 166 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 ZNF468Q5VIY5 522 aaPredicted RBP12.97□□□□□ -0.33
VRK3-217ENST00000599538 TIPARPQ7Z3E1 657 aaKnown RBP12.97□□□□□ -0.33
VRK3-217ENST00000599538 ZNF433Q8N7K0 673 aaPredicted RBP12.97□□□□□ -0.33
VRK3-217ENST00000599538 ZNF248Q8NDW4 579 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 OR8B4Q96RC9 309 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 SNX18Q96RF0 628 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 CMKLR1Q99788 373 aa12.97□□□□□ -0.33
VRK3-217ENST00000599538 PROK2Q9HC23 129 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms