RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 ZNF250P15622 560 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 EPHA1P21709 976 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 KLF3P57682 345 aaPredicted RBP18.09■□□□□ 0.49
PNKP-212ENST00000599454 ZP4Q12836 540 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 ACSM5Q6NUN0 579 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 WDR88Q6ZMY6 472 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 SLC35D2Q76EJ3 337 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 C3orf56Q8N813 242 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 OR1J2Q8NGS2 313 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 SGMS2Q8NHU3 365 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 SYNPRQ8TBG9 265 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 GCDHQ92947 438 aaPredicted RBP18.09■□□□□ 0.49
PNKP-212ENST00000599454 SLC25A44Q96H78 314 aaPredicted RBP18.09■□□□□ 0.49
PNKP-212ENST00000599454 MCHR1Q99705 422 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 ZNF665Q9H7R5 613 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 CDH20Q9HBT6 801 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 G6PC2Q9NQR9 355 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 SLAMF8Q9P0V8 285 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 ANGPT4Q9Y264 503 aa18.09■□□□□ 0.49
PNKP-212ENST00000599454 TRBV5-3A0A0A0MS03 114 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 POLR3GO15318 223 aaPredicted RBP18.08■□□□□ 0.48
PNKP-212ENST00000599454 MFN2O95140 757 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 SNAP29O95721 258 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 PATE4P0C8F1 98 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 MAGEB1P43366 347 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 LIMS1P48059 325 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 ARFIP2P53365 341 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 RBBP4Q09028 425 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 MOGQ16653 247 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 NRN1LQ496H8 165 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 THSD4Q6ZMP0 1018 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 FUNDC1Q8IVP5 155 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 FGFBP3Q8TAT2 258 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 ZNF519Q8TB69 540 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 C11orf40Q8WZ69 217 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 ZBTB9Q96C00 473 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 BCL2L14Q9BZR8 327 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 LRMDAQ9H2I8 198 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 TCF7L2Q9NQB0 619 aa18.08■□□□□ 0.48
PNKP-212ENST00000599454 ARHGAP32A7KAX9 2087 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 A0A0G2JMP0 313 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 A0A0X1KG70 313 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 DHHO43323 396 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 TGDSO95455 350 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 FAM157BP0CG42 384 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 AQP1P29972 269 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 CRYBB2P43320 205 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 RAD52P43351 418 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 ZNF74Q16587 644 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 TBC1D28Q2M2D7 210 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 ALKBH6Q3KRA9 238 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 SLC36A2Q495M3 483 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 PAGE3Q5JUK9 113 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 LRFN4Q6PJG9 635 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 PEG10Q86TG7 708 aaKnown RBP18.07■□□□□ 0.48
PNKP-212ENST00000599454 OR4M2Q8NGB6 313 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 ARHGDIGQ99819 225 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 WFDC6Q9BQY6 131 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 RNF121Q9H920 327 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 SLCO1B3Q9NPD5 702 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 NANSQ9NR45 359 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 TAS2R5Q9NYW4 299 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 CCDC167Q9P0B6 97 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 TANC2Q9HCD6 1990 aa18.07■□□□□ 0.48
PNKP-212ENST00000599454 J3QLI3 93 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 RNF13O43567 381 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 MGRN1O60291 552 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 MPZL1O95297 269 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 CLPTM1O96005 669 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 MT-ND5P03915 603 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 LCKP06239 509 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 VIMP08670 466 aaKnown RBP18.06■□□□□ 0.48
PNKP-212ENST00000599454 CCL8P80075 99 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 TTC33Q6PID6 262 aaPredicted RBP18.06■□□□□ 0.48
PNKP-212ENST00000599454 C1QL2Q7Z5L3 287 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 PAQR4Q8N4S7 273 aaPredicted RBP18.06■□□□□ 0.48
PNKP-212ENST00000599454 SH3GL3Q99963 347 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 SUCNR1Q9BXA5 334 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 IKZF5Q9H5V7 419 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.06■□□□□ 0.48
PNKP-212ENST00000599454 ZNF229Q9UJW7 825 aa18.06■□□□□ 0.48
PNKP-212ENST00000599454 LOC105371242A0A075B767 164 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 IGHV1-69-2A0A0G2JMI3 117 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 M0R3H8 397 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 CDC14BO60729 498 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 HIST1H2ABP04908 130 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 PGA4P0DJD7 388 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 PGA3P0DJD8 388 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 UCP2P55851 309 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 PCBP3P57721 371 aaKnown RBP18.05■□□□□ 0.48
PNKP-212ENST00000599454 MAGOHP61326 146 aaKnown RBP18.05■□□□□ 0.48
PNKP-212ENST00000599454 PLP2Q04941 152 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 C1orf229Q6ZS94 237 aaPredicted RBP18.05■□□□□ 0.48
PNKP-212ENST00000599454 HIST3H2AQ7L7L0 130 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 SLC16A14Q7RTX9 510 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 SMYD1Q8NB12 490 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 C11orf65Q8NCR3 313 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 OR4K5Q8NGD3 323 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 HIST1H2ACQ93077 130 aa18.05■□□□□ 0.48
PNKP-212ENST00000599454 C7orf26Q96N11 449 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms