RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 LIPT2A6NK58 231 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 CPSF4LA6NMK7 179 aaKnown RBP10.7□□□□□ -0.7
ZNF548-209ENST00000598895 ZNF716A6NP11 495 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 TMEM229AB2RXF0 380 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 C16orf97H3BN30 126 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 CCNB2O95067 398 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 AHSA1O95433 338 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 LGI1O95970 557 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 IGHV3-9P01782 118 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 FKBP2P26885 142 aaKnown RBP10.7□□□□□ -0.7
ZNF548-209ENST00000598895 ETV6P41212 452 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 CRYBA2P53672 197 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 FOXD4Q12950 439 aaPredicted RBP10.7□□□□□ -0.7
ZNF548-209ENST00000598895 SMN1Q16637 294 aaKnown RBP10.7□□□□□ -0.7
ZNF548-209ENST00000598895 NDUFA5Q16718 116 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 C1orf140Q5VVS0 124 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 TFAP2EQ6VUC0 442 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 RANBP3LQ86VV4 465 aaPredicted RBP10.7□□□□□ -0.7
ZNF548-209ENST00000598895 CXorf67Q86X51 503 aaPredicted RBP10.7□□□□□ -0.7
ZNF548-209ENST00000598895 LYSMD2Q8IV50 215 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 TMEM99Q8N816 258 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 OR6T1Q8NGN1 323 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 FAM222BQ8WU58 562 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 GGHQ92820 318 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 HPS1Q92902 700 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 SLC35B4Q969S0 331 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 KTI12Q96EK9 354 aaPredicted RBP10.7□□□□□ -0.7
ZNF548-209ENST00000598895 Q96MT0 163 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 WFIKKN1Q96NZ8 548 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 FEVQ99581 238 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 PIP5K1AQ99755 562 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 ARHGDIGQ99819 225 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 NAA11Q9BSU3 229 aaPredicted RBP10.7□□□□□ -0.7
ZNF548-209ENST00000598895 MED18Q9BUE0 208 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 CCDC32Q9BV29 185 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 POLDIP3Q9BY77 421 aaKnown RBP10.7□□□□□ -0.7
ZNF548-209ENST00000598895 TRIM2Q9C040 744 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 SIAEQ9HAT2 523 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 BCO1Q9HAY6 547 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 TMEM27Q9HBJ8 222 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 CLN6Q9NWW5 311 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 NPAP1Q9NZP6 1156 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 NDUFAF4Q9P032 175 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 NDRG3Q9UGV2 375 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 TRAPPC4Q9Y296 219 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 TESMINQ9Y4I5 508 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 PKDREJQ9NTG1 2253 aa10.7□□□□□ -0.7
ZNF548-209ENST00000598895 A6NNC1 897 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 M0R082 166 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 CASKO14936 926 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 CTAG2O75638 210 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 ADAP00813 363 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 EPXP11678 715 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 PIPP12273 146 aaPredicted RBP10.69□□□□□ -0.7
ZNF548-209ENST00000598895 RHCEP18577 417 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 GADD45AP24522 165 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 LIPAP38571 399 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 PCYT1AP49585 367 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 MAP2K6P52564 334 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 HMGA2P52926 109 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 CDH12P55289 794 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 IFITM3Q01628 133 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 EGR4Q05215 589 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 IRF3Q14653 427 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 ENTPD8Q5MY95 495 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 MEDAGQ5VYS4 303 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 ULK3Q6PHR2 472 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 STAC2Q6ZMT1 411 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 GDPGP1Q6ZNW5 385 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 BEND4Q6ZU67 534 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 C22orf34Q6ZV56 151 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 GPAT4Q86UL3 456 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 AKAP14Q86UN6 197 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 ZNF100Q8IYN0 542 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 LSMEM1Q8N8F7 131 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 POC5Q8NA72 575 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 PIGXQ8TBF5 258 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 CDCA4Q9BXL8 241 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 POTEKPQ9BYX7 375 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 C6orf62Q9GZU0 229 aaPredicted RBP10.69□□□□□ -0.7
ZNF548-209ENST00000598895 GP6Q9HCN6 339 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 ABCB10Q9NRK6 738 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 EMC3Q9P0I2 261 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 SEC14L4Q9UDX3 406 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 NOSIPQ9Y314 301 aaKnown RBP10.69□□□□□ -0.7
ZNF548-209ENST00000598895 MPDZO75970 2070 aa10.69□□□□□ -0.7
ZNF548-209ENST00000598895 IGKV1D-42A0A075B6H8 117 aa10.68□□□□□ -0.7
ZNF548-209ENST00000598895 A0A075B6Q4 140 aa10.68□□□□□ -0.7
ZNF548-209ENST00000598895 A0A0B4J2E0 115 aa10.68□□□□□ -0.7
ZNF548-209ENST00000598895 A0A1B0GX12 115 aa10.68□□□□□ -0.7
ZNF548-209ENST00000598895 HTR3EA5X5Y0 456 aa10.68□□□□□ -0.7
ZNF548-209ENST00000598895 ZNF724A8MTY0 619 aa10.68□□□□□ -0.7
ZNF548-209ENST00000598895 DNPH1O43598 174 aa10.68□□□□□ -0.7
ZNF548-209ENST00000598895 EIF1BO60739 113 aaKnown RBP10.68□□□□□ -0.7
ZNF548-209ENST00000598895 ADORA3P0DMS8 318 aa10.68□□□□□ -0.7
ZNF548-209ENST00000598895 DBTP11182 482 aaKnown RBP10.68□□□□□ -0.7
ZNF548-209ENST00000598895 GABRB1P18505 474 aa10.68□□□□□ -0.7
ZNF548-209ENST00000598895 GTF2E2P29084 291 aaKnown RBP10.68□□□□□ -0.7
ZNF548-209ENST00000598895 EPHA2P29317 976 aa10.68□□□□□ -0.7
ZNF548-209ENST00000598895 NTF4P34130 210 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms