RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ALG12Q9BV10 488 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 MRPL13Q9BYD1 178 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 OBP2BQ9NPH6 170 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 MGAT4BQ9UQ53 548 aa17.22■□□□□ 0.35
SHKBP1-214ENST00000597396 ARHGEF9O43307 516 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 GASTP01350 101 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 HOXB1P14653 301 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 ZNF83P51522 516 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 ZNF84P51523 738 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 RPS6KA3P51812 740 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 FXYD6P3P58550 94 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 RFX4Q33E94 735 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 GPR139Q6DWJ6 353 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 ZNF770Q6IQ21 691 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 LRFN4Q6PJG9 635 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 KLHL17Q6TDP4 642 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 SEZ6L2Q6UXD5 910 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 DPY19L2P2Q6ZN68 376 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 CDC20BQ86Y33 519 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 FNDC8Q8TC99 324 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 MCHR2Q969V1 340 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 GTPBP3Q969Y2 492 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 LURAP1Q96LR2 239 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 SAMD8Q96LT4 415 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 RAB3IPQ96QF0 476 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 RBP7Q96R05 134 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 KCNK17Q96T54 332 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 C1QTNF6Q9BXI9 259 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 NELFAQ9H3P2 528 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 NRIP3Q9NQ35 241 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 NPAP1Q9NZP6 1156 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 IER3IP1Q9Y5U9 82 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 AKAP6Q13023 2319 aa17.21■□□□□ 0.35
SHKBP1-214ENST00000597396 TEX13CA0A0J9YWL9 993 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 M0R1B8 84 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 PPP1R3DO95685 299 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 B4GALT1P15291 398 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 SDHAP31040 664 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 CAPZA2P47755 286 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 TUBA1BP68363 451 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 TUBA4AP68366 448 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 KRR1Q13601 381 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 HIST3H3Q16695 136 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 NCMAPQ5T1S8 102 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 RPL13AP3Q6NVV1 102 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 ZNF620Q6ZNG0 422 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 TUBA1AQ71U36 451 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 FAM122BQ7Z309 247 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 OR52L1Q8NGH7 329 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 RASD2Q96D21 266 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 HS3ST6Q96QI5 342 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 IFT27Q9BW83 186 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 DGCR6LQ9BY27 220 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 PDP1Q9P0J1 537 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 AP4S1Q9Y587 144 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 CDH10Q9Y6N8 788 aa17.2■□□□□ 0.34
SHKBP1-214ENST00000597396 ARPC4-TTLL3A0A0A6YYG9 625 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 SOCS2O14508 198 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 ENTPD5O75356 428 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 SLC2A10O95528 541 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 CD3EP07766 207 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 GSTM3P21266 225 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 LOXP28300 417 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 ARHGDIAP52565 204 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 FMODQ06828 376 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 BSPH1Q075Z2 132 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 MESTQ5EB52 335 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 RASSF6Q6ZTQ3 369 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 YTHDF3Q7Z739 585 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 TMEM179BQ7Z7N9 219 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 CCDC36Q8IYA8 594 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 DUS3LQ96G46 650 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 ERMAPQ96PL5 475 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 EGLN3Q9H6Z9 239 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 ARMC1Q9NVT9 282 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 ROS1P08922 2347 aa17.19■□□□□ 0.34
SHKBP1-214ENST00000597396 ARRDC5A6NEK1 342 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 DPRXA6NFQ7 191 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 H7C1C5 153 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 FCGR1AP12314 374 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 PAX7P23759 505 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 FASP25445 335 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 ZNF133P52736 654 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 LCN6P62502 163 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 GABPB1Q06547 395 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 KPNB1Q14974 876 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 THEM4Q5T1C6 240 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 C10orf128Q5T292 105 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 TMEM108Q6UXF1 575 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 ZNF627Q7L945 461 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 CLDN22Q8N7P3 220 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 NANOS1Q8WY41 292 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 NSMAFQ92636 917 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 FEVQ99581 238 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 SMURF2Q9HAU4 748 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 TBC1D23Q9NUY8 699 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 TMEM38BQ9NVV0 291 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 RNF115Q9Y4L5 304 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 DSCAMO60469 2012 aa17.18■□□□□ 0.34
SHKBP1-214ENST00000597396 TEP1Q99973 2627 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms