RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, human

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA4-208	ENST00000597023	SNX13	Q9Y5W8	968 aa		13.44	□□□□□ -0.26
PPFIA4-208	ENST00000597023		A0A1W2PRG6	482 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	VWC2L	B2RUY7	222 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	MCIDAS	D6RGH6	385 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023		J3KTA2	159 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	UBL3	O95164	117 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	IGHG1	P01857	330 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	IGFBP1	P08833	259 aa	Predicted RBP	13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	IGHV4-31	P0DP07	118 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	COX4I1	P13073	169 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	CCL2	P13500	99 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	ZNF35	P13682	527 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	ZNF16	P17020	682 aa	Predicted RBP	13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	TCN1	P20061	433 aa	Predicted RBP	13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	RBM34	P42696	430 aa	Known RBP	13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	NR4A2	P43354	598 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	PPOX	P50336	477 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	SELENOW	P63302	87 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	VLDLR	P98155	873 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	IQCC	Q4KMZ1	466 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	LRP11	Q86VZ4	500 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	ZNF584	Q8IVC4	421 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	SLC15A3	Q8IY34	581 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	OR4K5	Q8NGD3	323 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	LZIC	Q8WZA0	190 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	MCHR2	Q969V1	340 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	SYT3	Q9BQG1	590 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	MRPL37	Q9BZE1	423 aa	Known RBP	13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	RNF121	Q9H920	327 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	DYNLRB1	Q9NP97	96 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	INIP	Q9NRY2	104 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	TMEM38B	Q9NVV0	291 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	MED31	Q9Y3C7	131 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	CMAHP	Q9Y471	501 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	ABCA1	O95477	2261 aa		13.43	□□□□□ -0.26
PPFIA4-208	ENST00000597023	ARFGEF3	Q5TH69	2177 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	IGHV4-61	A0A0C4DH41	118 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	LYNX1	G3V0Z9	82 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	TRMU	O75648	421 aa	Known RBP	13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	OR8G3P	P0DMU2	310 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	LYNX1	P0DP58	116 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	LIPE	Q05469	1076 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	TOP3A	Q13472	1001 aa	Predicted RBP	13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	CYB5R2	Q6BCY4	276 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	TREML1	Q86YW5	311 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	HIPK1	Q86Z02	1210 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	ASB10	Q8WXI3	467 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	KCNK17	Q96T54	332 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	HOPX	Q9BPY8	73 aa	Predicted RBP	13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	BPESC1	Q9GZL8	116 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	OR51B6	Q9H340	312 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	A4GNT	Q9UNA3	340 aa		13.42	□□□□□ -0.26
PPFIA4-208	ENST00000597023	LOC390937	A0A1W2PQ73	354 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	CXCR6	O00574	342 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	NME4	O00746	187 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	GSTA4	O15217	222 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	SLC2A10	O95528	541 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	STAMBP	O95630	424 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	ZNF682	O95780	498 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	FAM157B	P0CG42	384 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	THRB	P10828	461 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	IFI30	P13284	250 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	DAO	P14920	347 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	ACADS	P16219	412 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	MAK	P20794	623 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	CDA	P32320	146 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	ALDH3B1	P43353	468 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	SLC7A2	P52569	658 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	SEC24C	P53992	1094 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	GALK2	Q01415	458 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	FMOD	Q06828	376 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	ALKBH6	Q3KRA9	238 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	IGFN1	Q86VF2	1251 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	LRRC18	Q8N456	261 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	ARIH2OS	Q8N7S6	290 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	NOXO1	Q8NFA2	376 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	NSMAF	Q92636	917 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	HDAC2	Q92769	488 aa	Known RBP	13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	MRPL24	Q96A35	216 aa	Known RBP	13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	CMTM5	Q96DZ9	223 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	MRPL13	Q9BYD1	178 aa	Known RBP	13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	NSRP1	Q9H0G5	558 aa	Known RBP	13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	EFCAB1	Q9HAE3	211 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	MYEF2	Q9P2K5	600 aa	Known RBP	13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	SPEF1	Q9Y4P9	236 aa		13.41	□□□□□ -0.26
PPFIA4-208	ENST00000597023	DNHD1	Q96M86	4753 aa		13.4	□□□□□ -0.26
PPFIA4-208	ENST00000597023	IGKV1D-43	A0A0B4J1Z2	117 aa		13.4	□□□□□ -0.26
PPFIA4-208	ENST00000597023	LRP5L	A4QPB2	252 aa		13.4	□□□□□ -0.26
PPFIA4-208	ENST00000597023	NDUFS8	O00217	210 aa		13.4	□□□□□ -0.26
PPFIA4-208	ENST00000597023	FARS2	O95363	451 aa	Known RBP	13.4	□□□□□ -0.26
PPFIA4-208	ENST00000597023	IGF2	P01344	180 aa		13.4	□□□□□ -0.26
PPFIA4-208	ENST00000597023	SERPINA5	P05154	406 aa		13.4	□□□□□ -0.26
PPFIA4-208	ENST00000597023	APEH	P13798	732 aa	Known RBP	13.4	□□□□□ -0.26
PPFIA4-208	ENST00000597023	NCK1	P16333	377 aa		13.4	□□□□□ -0.26
PPFIA4-208	ENST00000597023	ST3GAL3	Q11203	375 aa		13.4	□□□□□ -0.26
PPFIA4-208	ENST00000597023	HIST3H3	Q16695	136 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms