RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 ACANP16112 2415 aa18.33■□□□□ 0.53
PNKP-209ENST00000596726 TRBV4-1A0A0J9YWV2 114 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 ATP6V1G2-DDX39BF2Z307 99 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 CD99P14209 185 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 B4GALT1P15291 398 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 ATP6V1B2P21281 511 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 ARR3P36575 388 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 GPR4P46093 362 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 CLRN1P58418 232 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 NAAAQ02083 359 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 SEC23BQ15437 767 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 ZNF544Q6NX49 715 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 TRPM8Q7Z2W7 1104 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 MYPOPQ86VE0 399 aaPredicted RBP18.33■□□□□ 0.52
PNKP-209ENST00000596726 HDAC2Q92769 488 aaKnown RBP18.33■□□□□ 0.52
PNKP-209ENST00000596726 NMD3Q96D46 503 aaKnown RBP18.33■□□□□ 0.52
PNKP-209ENST00000596726 IL1RAPQ9NPH3 570 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 TAS2R1Q9NYW7 299 aa18.33■□□□□ 0.52
PNKP-209ENST00000596726 ZNF346Q9UL40 294 aaKnown RBP18.33■□□□□ 0.52
PNKP-209ENST00000596726 PRPF19Q9UMS4 504 aaKnown RBP18.33■□□□□ 0.52
PNKP-209ENST00000596726 HLA-HP01893 362 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 CELA3BP08861 270 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 ZNF26P17031 533 aaPredicted RBP18.32■□□□□ 0.52
PNKP-209ENST00000596726 OMPP47874 163 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 LIMS1P48059 325 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 CTXN1P60606 82 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 RPL27P61353 136 aaKnown RBP18.32■□□□□ 0.52
PNKP-209ENST00000596726 FGD3Q5JSP0 725 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 AGAP6Q5VW22 663 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 C11orf71Q6IPW1 123 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 SYT14Q8NB59 555 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 KCNK17Q96T54 332 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 MUC13Q9H3R2 512 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 NOX3Q9HBY0 568 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 DLL4Q9NR61 685 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 TMEM38BQ9NVV0 291 aa18.32■□□□□ 0.52
PNKP-209ENST00000596726 PTP4A3O75365 173 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 CRYAAP02489 173 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 CALCRP30988 508 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 CAPZA2P47755 286 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 FABP6P51161 128 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 IDH3GP51553 393 aaPredicted RBP18.31■□□□□ 0.52
PNKP-209ENST00000596726 SMIM11AP58511 58 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 MYBPC1Q00872 1141 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 TRIM25Q14258 630 aaKnown RBP18.31■□□□□ 0.52
PNKP-209ENST00000596726 ZBED5Q49AG3 693 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 MTX3Q5HYI7 312 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 C10orf128Q5T292 105 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 CYP2R1Q6VVX0 501 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 YTHDF3Q7Z739 585 aaKnown RBP18.31■□□□□ 0.52
PNKP-209ENST00000596726 IGFN1Q86VF2 1251 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 SKA3Q8IX90 412 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 FBXL14Q8N1E6 418 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 MUC15Q8N387 334 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 SLC22A24Q8N4F4 322 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 OR4K5Q8NGD3 323 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 ZNF519Q8TB69 540 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 NANOS1Q8WY41 292 aaKnown RBP18.31■□□□□ 0.52
PNKP-209ENST00000596726 MCUR1Q96AQ8 359 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 FAM46AQ96IP4 442 aaKnown RBP18.31■□□□□ 0.52
PNKP-209ENST00000596726 TSPAN32Q96QS1 320 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 KCNS3Q9BQ31 491 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 DENND2DQ9H6A0 471 aaPredicted RBP18.31■□□□□ 0.52
PNKP-209ENST00000596726 CBLN4Q9NTU7 201 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 ARFGEF3Q5TH69 2177 aa18.31■□□□□ 0.52
PNKP-209ENST00000596726 TCRBV5S2A0A599 114 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 SH3PXD2BA1X283 911 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 GADD45GO95257 159 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 FABP3P05413 133 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 OR8G3PP0DMU2 310 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 CD79AP11912 226 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 APOBEC3AP31941 199 aaPredicted RBP18.3■□□□□ 0.52
PNKP-209ENST00000596726 CDKN1AP38936 164 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 ATP5J2P56134 94 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 MS4A2Q01362 244 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 TOP3AQ13472 1001 aaPredicted RBP18.3■□□□□ 0.52
PNKP-209ENST00000596726 GSG1Q2KHT4 349 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 NRN1LQ496H8 165 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 FAM205BPQ63HN1 556 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 LCN8Q6JVE9 175 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 IL17RDQ8NFM7 739 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 OR52J3Q8NH60 311 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 GTPBP3Q969Y2 492 aaKnown RBP18.3■□□□□ 0.52
PNKP-209ENST00000596726 TRMT61AQ96FX7 289 aaKnown RBP18.3■□□□□ 0.52
PNKP-209ENST00000596726 ALG12Q9BV10 488 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 SMURF2Q9HAU4 748 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 SIGLEC7Q9Y286 467 aa18.3■□□□□ 0.52
PNKP-209ENST00000596726 ENTPD5O75356 428 aa18.29■□□□□ 0.52
PNKP-209ENST00000596726 PDE5AO76074 875 aa18.29■□□□□ 0.52
PNKP-209ENST00000596726 UBL3O95164 117 aa18.29■□□□□ 0.52
PNKP-209ENST00000596726 ZNF14P17017 642 aaPredicted RBP18.29■□□□□ 0.52
PNKP-209ENST00000596726 ACVR1BP36896 505 aa18.29■□□□□ 0.52
PNKP-209ENST00000596726 RAB1AP62820 205 aa18.29■□□□□ 0.52
PNKP-209ENST00000596726 SPIBQ01892 262 aa18.29■□□□□ 0.52
PNKP-209ENST00000596726 HGFACQ04756 655 aa18.29■□□□□ 0.52
PNKP-209ENST00000596726 PIGFQ07326 219 aa18.29■□□□□ 0.52
PNKP-209ENST00000596726 NPRL3Q12980 569 aa18.29■□□□□ 0.52
PNKP-209ENST00000596726 SLC25A47Q6Q0C1 308 aa18.29■□□□□ 0.52
PNKP-209ENST00000596726 ZDHHC21Q8IVQ6 265 aa18.29■□□□□ 0.52
PNKP-209ENST00000596726 OR4F15Q8NGB8 312 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms