RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ISYNA1Q9NPH2 558 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 KLHL13Q9P2N7 655 aa13.55□□□□□ -0.24
VRK3-207ENST00000594092 KIAA1549Q9HCM3 1950 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 FAM171A2A8MVW0 826 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 DNAJC13O75165 2243 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 VAMP5O95183 116 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 ZNF708P17019 499 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 ZNF24P17028 368 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 DOC2BQ14184 412 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 SPCS2Q15005 226 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 TBR1Q16650 682 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 PDSS1Q5T2R2 415 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 EEF1A1P5Q5VTE0 462 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 TMPRSS11AQ6ZMR5 421 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 Q6ZS92 163 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 OR6K6Q8NGW6 343 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 OR2T4Q8NH00 348 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 GATAD2BQ8WXI9 593 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 ALG12Q9BV10 488 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 EMC6Q9BV81 110 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 NUAK2Q9H093 628 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 MOKQ9UQ07 419 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 CAB39Q9Y376 341 aaPredicted RBP13.54□□□□□ -0.24
VRK3-207ENST00000594092 PCDHGB7Q9Y5F8 929 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 NCOR2Q9Y618 2525 aa13.54□□□□□ -0.24
VRK3-207ENST00000594092 TRGV5A0A0B4J1U4 118 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 TFECO14948 347 aaPredicted RBP13.53□□□□□ -0.24
VRK3-207ENST00000594092 ACTL6AO96019 429 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 UCNP55089 124 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 TMPRSS3P57727 454 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 VBP1P61758 197 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 SLC17A1Q14916 467 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 POU4F3Q15319 338 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 SSX1Q16384 188 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 BCL2A1Q16548 175 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 VASNQ6EMK4 673 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 LYPD4Q6UWN0 246 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 ZBTB46Q86UZ6 589 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 SYT14Q8NB59 555 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 RPL3LQ92901 407 aaKnown RBP13.53□□□□□ -0.24
VRK3-207ENST00000594092 ZNF845Q96IR2 970 aaPredicted RBP13.53□□□□□ -0.24
VRK3-207ENST00000594092 TBX5Q99593 518 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 ARHGAP9Q9BRR9 750 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 ZNF649Q9BS31 505 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 ALG8Q9BVK2 526 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 TSPAN10Q9H1Z9 355 aaPredicted RBP13.53□□□□□ -0.24
VRK3-207ENST00000594092 LDAHQ9H6V9 325 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 TIGARQ9NQ88 270 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 FKBP7Q9Y680 259 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 PTPRQQ9UMZ3 2332 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 CPEP16870 476 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 ZNF182P17025 639 aaPredicted RBP13.53□□□□□ -0.24
VRK3-207ENST00000594092 SRYQ05066 204 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 GALEQ14376 348 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 C19orf48Q6RUI8 117 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 ZNF322Q6U7Q0 402 aaPredicted RBP13.53□□□□□ -0.24
VRK3-207ENST00000594092 MEIOBQ8N635 442 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 RBMXL3Q8N7X1 1067 aaKnown RBP13.53□□□□□ -0.24
VRK3-207ENST00000594092 OR9K2Q8NGE7 335 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 UFD1Q92890 307 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 CPNE4Q96A23 557 aaPredicted RBP13.53□□□□□ -0.24
VRK3-207ENST00000594092 RERGLQ9H628 205 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 B9D1Q9UPM9 204 aa13.53□□□□□ -0.24
VRK3-207ENST00000594092 CACNA1GO43497 2377 aa13.52□□□□□ -0.24
VRK3-207ENST00000594092 IGLV1-36A0A0B4J1U3 117 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 SLC35F4A4IF30 521 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 AKAP8O43823 692 aaKnown RBP13.52□□□□□ -0.25
VRK3-207ENST00000594092 SLC16A7O60669 478 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 IGHG3P01860 377 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 OR2T7P0C7T2 308 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 CTLA4P16410 223 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 CD79BP40259 229 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 PEX19P40855 299 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 NCS1P62166 190 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 LIPKQ5VXJ0 399 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 CREB3L2Q70SY1 520 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 HDDC2Q7Z4H3 204 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 ATCAYQ86WG3 371 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 ZNF511Q8NB15 262 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 ZNF485Q8NCK3 441 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 OR2T27Q8NH04 317 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 OR6X1Q8NH79 312 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 SMAP2Q8WU79 429 aaPredicted RBP13.52□□□□□ -0.25
VRK3-207ENST00000594092 SPRYD4Q8WW59 207 aaPredicted RBP13.52□□□□□ -0.25
VRK3-207ENST00000594092 ROBO4Q8WZ75 1007 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 EXTL1Q92935 676 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 ABHD17AQ96GS6 310 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 SLC25A44Q96H78 314 aaPredicted RBP13.52□□□□□ -0.25
VRK3-207ENST00000594092 SF3B5Q9BWJ5 86 aaKnown RBP13.52□□□□□ -0.25
VRK3-207ENST00000594092 MRPL13Q9BYD1 178 aaKnown RBP13.52□□□□□ -0.25
VRK3-207ENST00000594092 OR51E2Q9H255 320 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 EXO5Q9H790 373 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 NDUFB11Q9NX14 153 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 SPRR3Q9UBC9 169 aa13.52□□□□□ -0.25
VRK3-207ENST00000594092 CACNA1AO00555 2505 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 LOC100506127A0A0U1RQW1 187 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 NPIPA2E9PIF3 369 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 NPIPA3F8WFD2 350 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 AHCYL1O43865 530 aa13.51□□□□□ -0.25
VRK3-207ENST00000594092 SELENOFO60613 162 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms