RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.45■□□□□ 0.38
LSM4-203ENST00000593829 GRIP1Q9Y3R0 1128 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 LYVE1Q9Y5Y7 322 aa17.45■□□□□ 0.38
LSM4-203ENST00000593829 HECTD1Q9ULT8 2610 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 CACNA1CQ13936 2221 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 MSTNO14793 375 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 YES1P07947 543 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 ADORA3P0DMS8 318 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 ANXA8P13928 327 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 C21orf33P30042 268 aaPredicted RBP17.44■□□□□ 0.38
LSM4-203ENST00000593829 AGTR1P30556 359 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.44■□□□□ 0.38
LSM4-203ENST00000593829 TIMM50Q3ZCQ8 353 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 TMEM201Q5SNT2 666 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 LUZP2Q86TE4 346 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 TUSC5Q8IXB3 177 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 PIGXQ8TBF5 258 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 KTI12Q96EK9 354 aaPredicted RBP17.44■□□□□ 0.38
LSM4-203ENST00000593829 SNX18Q96RF0 628 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 NPDC1Q9NQX5 325 aaPredicted RBP17.44■□□□□ 0.38
LSM4-203ENST00000593829 POFUT2Q9Y2G5 429 aa17.44■□□□□ 0.38
LSM4-203ENST00000593829 RBMX2Q9Y388 322 aaKnown RBP17.44■□□□□ 0.38
LSM4-203ENST00000593829 ASH1LQ9NR48 2969 aaKnown RBP17.44■□□□□ 0.38
LSM4-203ENST00000593829 INTS1Q8N201 2190 aaKnown RBP17.44■□□□□ 0.38
LSM4-203ENST00000593829 IGKV1D-42A0A075B6H8 117 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 CD8BP10966 210 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 RPS5P46782 204 aaKnown RBP17.43■□□□□ 0.38
LSM4-203ENST00000593829 RGS6P49758 472 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 TAS2R41P59536 307 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 IFI44LQ53G44 452 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 ABLIM2Q6H8Q1 611 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 ZNF544Q6NX49 715 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 PAQR6Q6TCH4 344 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 LINC00114Q6XXX2 140 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 MFSD8Q8NHS3 518 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 GEMIN6Q8WXD5 167 aaKnown RBP17.43■□□□□ 0.38
LSM4-203ENST00000593829 BCO1Q9HAY6 547 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 FOXD3Q9UJU5 478 aaPredicted RBP17.43■□□□□ 0.38
LSM4-203ENST00000593829 SLC7A7Q9UM01 511 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 PROCRQ9UNN8 238 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 A8MXE2 369 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 CENPBD1B2RD01 187 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 OR2T1O43869 369 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 CGAP01215 116 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 THY1P04216 161 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 IFNW1P05000 195 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 GRK5P34947 590 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 SOX6P35712 828 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 CCDC103Q8IW40 242 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 OR4C15Q8NGM1 316 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 C17orf50Q8WW18 174 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 RNASE6Q93091 150 aaKnown RBP17.43■□□□□ 0.38
LSM4-203ENST00000593829 SLC41A3Q96GZ6 507 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 TMEM43Q9BTV4 400 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 PTDSS2Q9BVG9 487 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 CDCA4Q9BXL8 241 aa17.43■□□□□ 0.38
LSM4-203ENST00000593829 ING1Q9UK53 422 aaPredicted RBP17.43■□□□□ 0.38
LSM4-203ENST00000593829 TRAV36DV7A0A075B6V5 113 aa17.42■□□□□ 0.38
LSM4-203ENST00000593829 ZNF814B7Z6K7 855 aa17.42■□□□□ 0.38
LSM4-203ENST00000593829 OR5F1O95221 314 aa17.42■□□□□ 0.38
LSM4-203ENST00000593829 LYPD3O95274 346 aa17.42■□□□□ 0.38
LSM4-203ENST00000593829 GTF2E2P29084 291 aaKnown RBP17.42■□□□□ 0.38
LSM4-203ENST00000593829 UQCRC1P31930 480 aa17.42■□□□□ 0.38
LSM4-203ENST00000593829 RCVRNP35243 200 aa17.42■□□□□ 0.38
LSM4-203ENST00000593829 SPANXN2Q5MJ10 180 aa17.42■□□□□ 0.38
LSM4-203ENST00000593829 HIST2H2BCQ6DN03 193 aa17.42■□□□□ 0.38
LSM4-203ENST00000593829 GDF7Q7Z4P5 450 aa17.42■□□□□ 0.38
LSM4-203ENST00000593829 RBM24Q9BX46 236 aaKnown RBP17.42■□□□□ 0.38
LSM4-203ENST00000593829 OPN3Q9H1Y3 402 aaPredicted RBP17.42■□□□□ 0.38
LSM4-203ENST00000593829 PLSCR4Q9NRQ2 329 aa17.42■□□□□ 0.38
LSM4-203ENST00000593829 ZNF226Q9NYT6 803 aa17.42■□□□□ 0.38
LSM4-203ENST00000593829 CNOT2Q9NZN8 540 aaKnown RBP17.42■□□□□ 0.38
LSM4-203ENST00000593829 EMC3Q9P0I2 261 aa17.42■□□□□ 0.38
LSM4-203ENST00000593829 ZNF724A8MTY0 619 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 AKR7A3O95154 331 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 RRM2P31350 389 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 PIN1Q13526 163 aaPredicted RBP17.41■□□□□ 0.38
LSM4-203ENST00000593829 ARMCX4Q5H9R4 360 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 FAM69AQ5T7M9 428 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 TMEM99Q8N816 258 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 CAPSLQ8WWF8 208 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 TAAR8Q969N4 342 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 SLC25A36Q96CQ1 311 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 NUAK2Q9H093 628 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 ENKD1Q9H0I2 346 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 CRNNQ9UBG3 495 aaPredicted RBP17.41■□□□□ 0.38
LSM4-203ENST00000593829 IGKV3D-15A0A087WSY6 115 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 SH3D21A4FU49 640 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 ZNF716A6NP11 495 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 FTCDNL1E5RQL4 147 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 TNFRSF11BO00300 401 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 CCNKO75909 580 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 KRT8P05787 483 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 TRAPPC2P0DI81 140 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 TRAPPC2BP0DI82 140 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 IFNA8P32881 189 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 WDR88Q6ZMY6 472 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 TSEN54Q7Z6J9 526 aaKnown RBP17.41■□□□□ 0.38
LSM4-203ENST00000593829 STX19Q8N4C7 294 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 ZNF610Q8N9Z0 462 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms