RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 CCL2P13500 99 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 ACHEP22303 614 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 DVL1P1P54792 670 aaPredicted RBP17.56■□□□□ 0.4
TRIM47-207ENST00000593089 REP15Q6BDI9 236 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 HIST3H2AQ7L7L0 130 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 SLC30A8Q8IWU4 369 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 RFLNBQ8N5W9 214 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 OR10A6Q8NH74 314 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 CLDND2Q8NHS1 167 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 HIST1H2ACQ93077 130 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 TAMM41Q96BW9 452 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 OR51B6Q9H340 312 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 ZNF385DQ9H6B1 395 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 KAT8Q9H7Z6 458 aaKnown RBP17.56■□□□□ 0.4
TRIM47-207ENST00000593089 INTS9Q9NV88 658 aaKnown RBP17.56■□□□□ 0.4
TRIM47-207ENST00000593089 ZNF229Q9UJW7 825 aa17.56■□□□□ 0.4
TRIM47-207ENST00000593089 B4DSR2 109 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 FARS2O95363 451 aaKnown RBP17.55■□□□□ 0.4
TRIM47-207ENST00000593089 BCL10O95999 233 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 QDPRP09417 244 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 PGA4P0DJD7 388 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 PGA3P0DJD8 388 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 PCGF2P35227 344 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 NKPD1Q17RQ9 610 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 RGS7BPQ6MZT1 257 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-207ENST00000593089 NANOGNBQ7Z5D8 188 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 PAQR4Q8N4S7 273 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-207ENST00000593089 SLC30A7Q8NEW0 376 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 OR4K5Q8NGD3 323 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 YIPF5Q969M3 257 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 MPP4Q96JB8 637 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 LPAR2Q9HBW0 351 aa17.55■□□□□ 0.4
TRIM47-207ENST00000593089 ZNF275Q9NSD4 429 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-207ENST00000593089 ANK2Q01484 3957 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 BLOC1S5-TXNDC5H3BN57 136 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 WNT9BO14905 357 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 ENTPD5O75356 428 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 NCR1O76036 304 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 CLPTM1O96005 669 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 ASAH2BP0C7U1 165 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 SAGP10523 405 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-207ENST00000593089 ITGA2P17301 1181 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 PCMT1P22061 227 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 CLRN1P58418 232 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 MYBPC1Q00872 1141 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 INTS11Q5TA45 600 aaKnown RBP17.54■□□□□ 0.4
TRIM47-207ENST00000593089 TMEM53Q6P2H8 277 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 SLC16A14Q7RTX9 510 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 GLCCI1Q86VQ1 547 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 PRSS27Q9BQR3 290 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 ZNF426Q9BUY5 554 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 SLC19A3Q9BZV2 496 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 CDH20Q9HBT6 801 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 TAAR3PQ9P1P4 343 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 ZNF346Q9UL40 294 aaKnown RBP17.54■□□□□ 0.4
TRIM47-207ENST00000593089 TRIM33Q9UPN9 1127 aa17.54■□□□□ 0.4
TRIM47-207ENST00000593089 SLC22A23A1A5C7 686 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 FAM157AC9JC47 383 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 PPIHO43447 177 aaKnown RBP17.53■□□□□ 0.4
TRIM47-207ENST00000593089 IGHG1P01857 330 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 F13BP05160 661 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 MAGEB1P43366 347 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 SLC36A2Q495M3 483 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 STON2Q8WXE9 905 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 MCHR2Q969V1 340 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 TSPAN32Q96QS1 320 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 ZNF347Q96SE7 839 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 PCDHAC1Q9H158 963 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 NPHS2Q9NP85 383 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 MEPEQ9NQ76 525 aaPredicted RBP17.53■□□□□ 0.4
TRIM47-207ENST00000593089 TREM2Q9NZC2 230 aa17.53■□□□□ 0.4
TRIM47-207ENST00000593089 MCIDASD6RGH6 385 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 LCKP06239 509 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 CRYBA2P53672 197 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 ERVS71-1P61550 626 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 RUNX1T1Q06455 604 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 RPL18Q07020 188 aaKnown RBP17.52■□□□□ 0.4
TRIM47-207ENST00000593089 TBC1D28Q2M2D7 210 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 VMACQ2NL98 169 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 ICA1LQ8NDH6 482 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 NOXO1Q8NFA2 376 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 PFN4Q8NHR9 129 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 SYNPRQ8TBG9 265 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 TSPEARQ8WU66 669 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 MAGEB18Q96M61 343 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 RACGAP1Q9H0H5 632 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 C1orf198Q9H425 327 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 OCEL1Q9H607 264 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 HIF1ANQ9NWT6 349 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 METRNQ9UJH8 293 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 SH3GLB1Q9Y371 365 aa17.52■□□□□ 0.4
TRIM47-207ENST00000593089 A0A1W2PRG6 482 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 TFP02787 698 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 VIMP08670 466 aaKnown RBP17.51■□□□□ 0.39
TRIM47-207ENST00000593089 TNFRSF1BP20333 461 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 GZMMP51124 257 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 ZNF84P51523 738 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 TMEM33P57088 247 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 KLF3P57682 345 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-207ENST00000593089 SELENOVP59797 346 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms