RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 NPIPB4C9JG80 1138 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 hCG_2039718K7EN88 272 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 IGHG1P01857 330 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 F13BP05160 661 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 ERCC1P07992 297 aaPredicted RBP8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 QDPRP09417 244 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 COX4I1P13073 169 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 NR4A2P43354 598 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 GIPRP48546 466 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 PTDSS1P48651 473 aaKnown RBP8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 PDLIM4P50479 330 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 DAP3P51398 398 aaKnown RBP8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 ZNF133P52736 654 aaPredicted RBP8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 UGT2B15P54855 530 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 RPL18Q07020 188 aaKnown RBP8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 LAPTM4AQ15012 233 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 LRRC23Q53EV4 343 aaPredicted RBP8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 C8orf82Q6P1X6 216 aaPredicted RBP8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 CCDC121Q6ZUS5 278 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 HDDC2Q7Z4H3 204 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 SPATA21Q7Z572 469 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 HIPK1Q86Z02 1210 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 SKA3Q8IX90 412 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 POU5F2Q8N7G0 328 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 ZNF540Q8NDQ6 660 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 PFN4Q8NHR9 129 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 NEU4Q8WWR8 484 aaPredicted RBP8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 SGTBQ96EQ0 304 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 MS4A3Q96HJ5 214 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 TPD52L3Q96J77 140 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 FOXN4Q96NZ1 517 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 ELAC2Q9BQ52 826 aaKnown RBP8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 YAE1D1Q9NRH1 226 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 INIPQ9NRY2 104 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 C20orf141Q9NUB4 165 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 TMEM38BQ9NVV0 291 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 STX18Q9P2W9 335 aaKnown RBP8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 A4GNTQ9UNA3 340 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 PLCE1Q9P212 2302 aa8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 HEATR1Q9H583 2144 aaKnown RBP8.38□□□□□ -1.07
PRKCSH-215ENST00000592435 A8MV72 311 aaPredicted RBP8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 MCIDASD6RGH6 385 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 DNAJC8O75937 253 aaPredicted RBP8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 FARS2O95363 451 aaKnown RBP8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 RAB36O95755 333 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 PTHP01270 115 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 ACADSP16219 412 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 GIFP27352 417 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 GLRXP35754 106 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 AQP2P41181 271 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 ZNF84P51523 738 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 CLRN1P58418 232 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 LSM11P83369 360 aaKnown RBP eCLIP8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 LIPEQ05469 1076 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 RUNX1T1Q06455 604 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 SNTB2Q13425 540 aaKnown RBP8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 MELKQ14680 651 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 FXNQ16595 210 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 ARMC4Q5T2S8 1044 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 C6orf52Q5T4I8 152 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 KRT80Q6KB66 452 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 HACD2Q6Y1H2 254 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 TRPM8Q7Z2W7 1104 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 ZNF584Q8IVC4 421 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 RNF113BQ8IZP6 322 aaKnown RBP8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 SVOPLQ8N434 492 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 ASB10Q8WXI3 467 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 MCHR2Q969V1 340 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 MRPL24Q96A35 216 aaKnown RBP8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 BPIFA2Q96DR5 249 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 PRRC1Q96M27 445 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 SH3GL3Q99963 347 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 PIMREGQ9BSJ6 248 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 SMURF2Q9HAU4 748 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 HIF3AQ9Y2N7 669 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 ARL2BPQ9Y2Y0 163 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 TLN2Q9Y4G6 2542 aa8.37□□□□□ -1.07
PRKCSH-215ENST00000592435 SLC22A23A1A5C7 686 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 SH3PXD2BA1X283 911 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 KIAA1324LA8MWY0 1029 aaPredicted RBP8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 CXCR6O00574 342 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 NME4O00746 187 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 FFAR1O14842 300 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 SYNGR3O43761 229 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 TRMUO75648 421 aaKnown RBP8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 IFNW1P05000 195 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 IGFBP1P08833 259 aaPredicted RBP8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 PATE4P0C8F1 98 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 IGHV4-31P0DP07 118 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 NR2C1P13056 603 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 GZMKP49863 264 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 SLC7A2P52569 658 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 GALK2Q01415 458 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 RAB39AQ14964 217 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 TRAM2Q15035 370 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 TAF11Q15544 211 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 ANKDD1AQ495B1 522 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 SLC36A2Q495M3 483 aa8.36□□□□□ -1.07
PRKCSH-215ENST00000592435 C10orf128Q5T292 105 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms