RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 RPL18Q07020 188 aaKnown RBP6.71□□□□□ -1.34
ZNF540-206ENST00000589117 PLCXD2Q0VAA5 305 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 SRSF5Q13243 272 aaKnown RBP6.71□□□□□ -1.34
ZNF540-206ENST00000589117 LINC01590Q5TEZ4 76 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 LIPNQ5VXI9 398 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 CBLN3Q6UW01 205 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 GLCCI1Q86VQ1 547 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 RFLNBQ8N5W9 214 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 OR5H6Q8NGV6 325 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 LGALS14Q8TCE9 139 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 GPR148Q8TDV2 347 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 THEM6Q8WUY1 208 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 TMEM234Q8WY98 164 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 NSMAFQ92636 917 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 SCMH1Q96GD3 660 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 MOGAT1Q96PD6 335 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 DPYSL5Q9BPU6 564 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 SLC7A5P2Q9GIP4 190 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 OR51J1Q9H342 316 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 GALNT9Q9HCQ5 603 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 ZNF222Q9UK12 451 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 COPS3Q9UNS2 423 aa6.71□□□□□ -1.34
ZNF540-206ENST00000589117 TMEM184BQ9Y519 407 aaPredicted RBP6.71□□□□□ -1.34
ZNF540-206ENST00000589117 IGKV3D-11A0A0A0MRZ8 115 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 SHISA7A6NL88 538 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 TO15178 435 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 ICOSLGO75144 302 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 KRT33AO76009 404 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 HLA-DQA2P01906 255 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 CLPSP04118 112 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 WNT1P04628 370 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 THBDP07204 575 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 FAUP35544 74 aaKnown RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 GDNFP39905 211 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 NR0B1P51843 470 aaKnown RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 POLR2HP52434 150 aaKnown RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 SMAD4Q13485 552 aaKnown RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 GXYLT1Q4G148 440 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 TMEM69Q5SWH9 247 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 ZNF684Q5T5D7 378 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 KCTD18Q6PI47 426 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 CDC20BQ86Y33 519 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 MISPQ8IVT2 679 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 TIGD4Q8IY51 512 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 CMTM4Q8IZR5 234 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 DEFB119Q8N690 84 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 DTX3Q8N9I9 347 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 OR1N1Q8NGS0 311 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 OR6N2Q8NGY6 317 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 ZNF721Q8TF20 911 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 TAAR8Q969N4 342 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 ADIPOR1Q96A54 375 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 KTI12Q96EK9 354 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 FOXQ1Q9C009 403 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 HSPB11Q9Y547 144 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 PCDHGA9Q9Y5G4 932 aaKnown RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 ACOD1A6NK06 481 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 A8MVM7 634 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 FAM171A2A8MVW0 826 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 ACOT7O00154 380 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 SSNA1O43805 119 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 KHDRBS3O75525 346 aaKnown RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 DDAH2O95865 285 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 OR8G3PP0DMU2 310 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 GLB1P16278 677 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 GRPRP30550 384 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 SRP9P49458 86 aaKnown RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 P2RX1P51575 399 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 CCR9P51686 369 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 NXPH1P58417 271 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 DGCR2P98153 550 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 EGR4Q05215 589 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 DBPQ10586 325 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 UBXN2BQ14CS0 331 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 MFSD13AQ14CX5 517 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 EBPQ15125 230 aaKnown RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 SGCBQ16585 318 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 HES5Q5TA89 166 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 ARHGAP40Q5TG30 622 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 EEF1A1P5Q5VTE0 462 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 STAC2Q6ZMT1 411 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 ZNF782Q6ZMW2 699 aaPredicted RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 FCRLAQ7L513 359 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 TDHQ8IZJ6 230 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 LRRC75AQ8NAA5 344 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 MIB2Q96AX9 1013 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 GHITMQ9H3K2 345 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 PLEKHA1Q9HB21 404 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 C2orf42Q9NWW7 574 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 TAS2R10Q9NYW0 307 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 TAS2R8Q9NYW2 309 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 CKLFQ9UBR5 152 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 ZNF346Q9UL40 294 aaKnown RBP6.7□□□□□ -1.34
ZNF540-206ENST00000589117 MKL2Q9ULH7 1088 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 SRPK3Q9UPE1 567 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 FKBP7Q9Y680 259 aa6.7□□□□□ -1.34
ZNF540-206ENST00000589117 COL4A2P08572 1712 aa6.69□□□□□ -1.34
ZNF540-206ENST00000589117 XIRP2A4UGR9 3374 aa6.69□□□□□ -1.34
ZNF540-206ENST00000589117 IGHV1OR21-1A0A087WYE8 117 aa6.69□□□□□ -1.34
ZNF540-206ENST00000589117 A0A1B0GX78 115 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms