RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 DEC1Q9P2X7 70 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 TRAPPC4Q9Y296 219 aa2.25□□□□□ -2.05
SMAD4-207ENST00000589076 CEMIPQ8WUJ3 1361 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.24□□□□□ -2.053e-7■□□□□ 10.7
SMAD4-207ENST00000589076 FBN3Q75N90 2809 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 WDR62O43379 1518 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 TRAV39A0A0B4J263 110 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 A0A0B4J2A0 478 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 IGHV3-64DA0A0J9YX35 117 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 SMCO3A2RU48 225 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 PRSS37A4D1T9 235 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 CTAGE15A4D2H0 777 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF726A6NNF4 738 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 HMMRO75330 724 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 ZDHHC11BP0C7U3 371 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF24P17028 368 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF43P17038 809 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 FOXN2P32314 431 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 TNNT2P45379 298 aaPredicted RBP2.24□□□□□ -2.05
SMAD4-207ENST00000589076 CCR8P51685 355 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 RPS21P63220 83 aaKnown RBP2.24□□□□□ -2.05
SMAD4-207ENST00000589076 IRX3P78415 501 aaPredicted RBP2.24□□□□□ -2.05
SMAD4-207ENST00000589076 MECOMQ03112 1051 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF92Q03936 586 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 SMARCB1Q12824 385 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 PSG5Q15238 335 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 GUCA2BQ16661 112 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 TMEM183BQ1AE95 376 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 XKR7Q5GH72 579 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 PIGGQ5H8A4 983 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 ARMC12Q5T9G4 340 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 RAET1LQ5VY80 246 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 METAP1DQ6UB28 335 aaPredicted RBP2.24□□□□□ -2.05
SMAD4-207ENST00000589076 C19orf35Q6ZS72 473 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 CTAGE6Q86UF2 777 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 TMEM183AQ8IXX5 376 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 LIX1Q8N485 282 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 B3GNT7Q8NFL0 401 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 RHEBL1Q8TAI7 183 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 SLC22A8Q8TCC7 542 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 GEMIN6Q8WXD5 167 aaKnown RBP2.24□□□□□ -2.05
SMAD4-207ENST00000589076 TMEM54Q969K7 222 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 ASB9Q96DX5 294 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 DNTTIP1Q9H147 329 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 DMAP1Q9NPF5 467 aaPredicted RBP2.24□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF331Q9NQX6 463 aaPredicted RBP2.24□□□□□ -2.05
SMAD4-207ENST00000589076 INPP5EQ9NRR6 644 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 SHPKQ9UHJ6 478 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 KIAA1109Q2LD37 5005 aa2.24□□□□□ -2.05
SMAD4-207ENST00000589076 CARMIL3Q8ND23 1372 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 SETD2Q9BYW2 2564 aaPredicted RBP2.23□□□□□ -2.05
SMAD4-207ENST00000589076 ASTN1O14525 1302 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 CENPJQ9HC77 1338 aaPredicted RBP2.23□□□□□ -2.05
SMAD4-207ENST00000589076 MRPS12O15235 138 aaKnown RBP2.23□□□□□ -2.05
SMAD4-207ENST00000589076 ERLIN1O75477 346 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 AGTP01019 485 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 FGGP02679 453 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 HOXA9P31269 272 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 HNRNPH3P31942 346 aaKnown RBP2.23□□□□□ -2.05
SMAD4-207ENST00000589076 SERPINB5P36952 375 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 RORCP51449 518 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 SSR4P51571 173 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 CCNHP51946 323 aaPredicted RBP2.23□□□□□ -2.05
SMAD4-207ENST00000589076 CRISP3P54108 245 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 HERVK_113P61574 105 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 YWHAGP61981 247 aaKnown RBP eCLIP2.23□□□□□ -2.05
SMAD4-207ENST00000589076 HMGCS1Q01581 520 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 REG3AQ06141 175 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 ECH1Q13011 328 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 PRPSAP1Q14558 356 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 VAX1Q5SQQ9 334 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 CERS6Q6ZMG9 384 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF836Q6ZNA1 936 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 TMEM179Q6ZVK1 233 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 NIPA1Q7RTP0 329 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 MREGQ8N565 214 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 MS4A15Q8N5U1 240 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF433Q8N7K0 673 aaPredicted RBP2.23□□□□□ -2.05
SMAD4-207ENST00000589076 Q8N9L7 120 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 DUSP18Q8NEJ0 188 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 OR4C5Q8NGB2 326 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 OR1S2Q8NGQ3 325 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 ACTRT1Q8TDG2 376 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 CD300LFQ8TDQ1 290 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 CXorf40AQ8TE69 158 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 GIMAP1Q8WWP7 306 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 SRSF12Q8WXF0 261 aaKnown RBP2.23□□□□□ -2.05
SMAD4-207ENST00000589076 EXOSC8Q96B26 276 aaKnown RBP2.23□□□□□ -2.05
SMAD4-207ENST00000589076 DNAJC19Q96DA6 116 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 CCDC126Q96EE4 140 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 ZNF578Q96N58 590 aaPredicted RBP2.23□□□□□ -2.05
SMAD4-207ENST00000589076 TSSK3Q96PN8 268 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 ATP5SQ99766 215 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 HDHD3Q9BSH5 251 aaPredicted RBP2.23□□□□□ -2.05
SMAD4-207ENST00000589076 LINC00597Q9H2U6 94 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 IFI27L2Q9H2X8 130 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 UGT1A7Q9HAW7 530 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 UGT1A10Q9HAW8 530 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 UGT1A8Q9HAW9 530 aa2.23□□□□□ -2.05
SMAD4-207ENST00000589076 CTNNA3Q9UI47 895 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms