RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 NARFLQ9H6Q4 476 aa11.96□□□□□ -0.49
VMP1-209ENST00000588915 TCF7L2Q9NQB0 619 aa11.96□□□□□ -0.49
VMP1-209ENST00000588915 HINT3Q9NQE9 182 aaKnown RBP11.96□□□□□ -0.49
VMP1-209ENST00000588915 TMEM38BQ9NVV0 291 aa11.96□□□□□ -0.49
VMP1-209ENST00000588915 TAAR3PQ9P1P4 343 aa11.96□□□□□ -0.49
VMP1-209ENST00000588915 EVPLLA8MZ36 301 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 CHP2O43745 196 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 MFN2O95140 757 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 EPHA1P21709 976 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 GATA3P23771 443 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 MAGEB1P43366 347 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 SLC36A2Q495M3 483 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 LRFN4Q6PJG9 635 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 EPGNQ6UW88 154 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 WDR88Q6ZMY6 472 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 SLC35D2Q76EJ3 337 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 PEG10Q86TG7 708 aaKnown RBP11.95□□□□□ -0.5
VMP1-209ENST00000588915 ARMC8Q8IUR7 673 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 FUNDC1Q8IVP5 155 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 MSRB3Q8IXL7 192 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 FGFBP3Q8TAT2 258 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 ZNF566Q969W8 418 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 SPDL1Q96EA4 605 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 SUCNR1Q9BXA5 334 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 LRMDAQ9H2I8 198 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 ZNF665Q9H7R5 613 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 CDH20Q9HBT6 801 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 LPAR2Q9HBW0 351 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 NKIRAS1Q9NYS0 192 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 VAPAQ9P0L0 249 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 SLAMF8Q9P0V8 285 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 RAB21Q9UL25 225 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 FZR1Q9UM11 496 aa11.95□□□□□ -0.5
VMP1-209ENST00000588915 TRBV5-3A0A0A0MS03 114 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 A0A0G2JMP0 313 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 A0A0X1KG70 313 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 CENPBD1B2RD01 187 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 LRRN3E7EW58 273 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 DHHO43323 396 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 DEAF1O75398 565 aaPredicted RBP11.94□□□□□ -0.5
VMP1-209ENST00000588915 SERPINI2O75830 405 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 MPZL1O95297 269 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 MT-ND5P03915 603 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 EGR1P18146 543 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 UCP2P55851 309 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 PLP2Q04941 152 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 RBBP4Q09028 425 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 ZNF74Q16587 644 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 TBC1D28Q2M2D7 210 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 C1orf229Q6ZS94 237 aaPredicted RBP11.94□□□□□ -0.5
VMP1-209ENST00000588915 C1QL2Q7Z5L3 287 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 C10orf111Q8N326 155 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 OR4M2Q8NGB6 313 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 MCHR1Q99705 422 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 SLC19A3Q9BZV2 496 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 RNF121Q9H920 327 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 SLCO1B3Q9NPD5 702 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 TAS2R5Q9NYW4 299 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 USH1CQ9Y6N9 552 aa11.94□□□□□ -0.5
VMP1-209ENST00000588915 C11orf98E9PRG8 122 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 POLR3GO15318 223 aaPredicted RBP11.93□□□□□ -0.5
VMP1-209ENST00000588915 WIPF1O43516 503 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 PLPP2O43688 288 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 CLPTM1O96005 669 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 AVPP01185 164 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 IGHV3-13P01766 116 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 VIMP08670 466 aaKnown RBP11.93□□□□□ -0.5
VMP1-209ENST00000588915 PATE4P0C8F1 98 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 PGA4P0DJD7 388 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 PGA3P0DJD8 388 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 CCL8P80075 99 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 HIST3H3Q16695 136 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 PAGE3Q5JUK9 113 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 C1orf174Q8IYL3 243 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 NANPQ8TBE9 248 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 RAB1CQ92928 201 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 TIMD4Q96H15 378 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 MPP4Q96JB8 637 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 ARHGDIGQ99819 225 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 WFDC6Q9BQY6 131 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 TMPRSS13Q9BYE2 586 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 NANSQ9NR45 359 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 DECR2Q9NUI1 292 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 ZNF229Q9UJW7 825 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 ANGPT4Q9Y264 503 aa11.93□□□□□ -0.5
VMP1-209ENST00000588915 LOC105371242A0A075B767 164 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 IGHV1-69-2A0A0G2JMI3 117 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 IQCMA0A1B0GVH7 501 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 CLDN25C9JDP6 229 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 RNF13O43567 381 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 CDC14BO60729 498 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 ERLIN1O75477 346 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 BCL10O95999 233 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 IGHV2-5P01817 119 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 IGHG1P01857 330 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 HIST1H2ABP04908 130 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 LCKP06239 509 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 QDPRP09417 244 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 FAM157BP0CG42 384 aa11.92□□□□□ -0.5
VMP1-209ENST00000588915 ZNF84P51523 738 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms