RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ANPEPP15144 967 aa16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 POU1F1P28069 291 aa16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 LRFN4Q6PJG9 635 aa16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 C22orf34Q6ZV56 151 aa16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 PTCHD4Q6ZW05 846 aa16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 DMRTC2Q8IXT2 367 aaPredicted RBP16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 IQCF1Q8N6M8 205 aa16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 STEAP2Q8NFT2 490 aa16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 LINC01560Q8TB33 94 aa16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 MCHR2Q969V1 340 aa16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 NMD3Q96D46 503 aaKnown RBP16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 HDHD5Q9BXW7 423 aa16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 TMEFF2Q9UIK5 374 aaPredicted RBP16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 HECTD1Q9ULT8 2610 aa16.67■□□□□ 0.26
CLPTM1-209ENST00000588855 PRR14LQ5THK1 2151 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 IGKV1D-43A0A0B4J1Z2 117 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 EI24O14681 340 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 IMPA2O14732 288 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 RRP9O43818 475 aaKnown RBP16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 SEC14L2O76054 403 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 SLC2A10O95528 541 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 HIST1H1CP16403 213 aaKnown RBP16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 IGFBP5P24593 272 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 NOS3P29474 1203 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 GABRA6Q16445 453 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 SLC35F1Q5T1Q4 408 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 SP5Q6BEB4 398 aaPredicted RBP16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 PARP8Q8N3A8 854 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 OR2T33Q8NG76 320 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 OR1K1Q8NGR3 316 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 OSBPL10Q9BXB5 764 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 PKDREJQ9NTG1 2253 aa16.66■□□□□ 0.26
CLPTM1-209ENST00000588855 DCHS2Q6V1P9 2916 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 NBPF19A0A087WUL8 3843 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 SLC22A23A1A5C7 686 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 PRSS37A4D1T9 235 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 TUBAL3A6NHL2 446 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 DHHO43323 396 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 CDKN2AP42771 156 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 ARF1P84077 181 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 TGFBR3Q03167 851 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 DAG1Q14118 895 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 STK11Q15831 433 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 PGGHGQ32M88 737 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 ADCK1Q86TW2 530 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 LNX2Q8N448 690 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 CBR4Q8N4T8 237 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 C1orf162Q8NEQ5 155 aaPredicted RBP16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 SDR9C7Q8NEX9 313 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 OR4K13Q8NH42 304 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 WFIKKN1Q96NZ8 548 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 RBM4BQ9BQ04 359 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 MED18Q9BUE0 208 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 RBM4Q9BWF3 364 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 OR10A4Q9H209 315 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 SH3D21A4FU49 640 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 ZNF99A8MXY4 864 aaPredicted RBP16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 IDH3BO43837 385 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 PEX19P40855 299 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 KIR2DL3P43628 341 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 ZNF133P52736 654 aaPredicted RBP16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 SH3BGRP55822 239 aaPredicted RBP16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 HIKESHIQ53FT3 197 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 HIST2H2BCQ6DN03 193 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 LEG1Q6P5S2 330 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 JAZF1Q86VZ6 243 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 ZC3HAV1LQ96H79 300 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 MUS81Q96NY9 551 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 RBP7Q96R05 134 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 NMNAT3Q96T66 252 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 SPOCK3Q9BQ16 436 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 C9orf16Q9BUW7 83 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 SYT4Q9H2B2 425 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 NELFAQ9H3P2 528 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 VSX1Q9NZR4 365 aaPredicted RBP16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 CRIM1Q9NZV1 1036 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 BAIAP2Q9UQB8 552 aa16.65■□□□□ 0.26
CLPTM1-209ENST00000588855 H0YHG0 523 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 ALPLP05186 524 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 NR2C1P13056 603 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 B4GALT1P15291 398 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 CRISP1P54107 249 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 GINS1Q14691 196 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 THEM4Q5T1C6 240 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 C10orf128Q5T292 105 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 OR7E24Q6IFN5 339 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 ACSM5Q6NUN0 579 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 SLC27A4Q6P1M0 643 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 SLC25A47Q6Q0C1 308 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 OR52E2Q8NGJ4 325 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 FNDC8Q8TC99 324 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 NSMAFQ92636 917 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 HTRA1Q92743 480 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 EME1Q96AY2 570 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 FOXB1Q99853 325 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 USE1Q9NZ43 259 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 NDRG3Q9UGV2 375 aa16.64■□□□□ 0.25
CLPTM1-209ENST00000588855 A0A096LPE4 126 aa16.63■□□□□ 0.25
CLPTM1-209ENST00000588855 A0A1W2PPZ6 126 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms