RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TRDV1A0A1B0GX56 115 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 TNFSF11O14788 317 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 TRAF3IP2O43734 574 aaPredicted RBP17.74■□□□□ 0.43
TRIM47-204ENST00000587339 KLK2P20151 261 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 FGF9P31371 208 aaPredicted RBP17.74■□□□□ 0.43
TRIM47-204ENST00000587339 GBX2P52951 348 aaPredicted RBP17.74■□□□□ 0.43
TRIM47-204ENST00000587339 DYNC1I2Q13409 638 aaKnown RBP17.74■□□□□ 0.43
TRIM47-204ENST00000587339 ARL9Q6T311 187 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 DPY19L4Q7Z388 723 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 KCTD7Q96MP8 289 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 FOXN4Q96NZ1 517 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 HDHD5Q9BXW7 423 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 CCDC59Q9P031 241 aaKnown RBP17.74■□□□□ 0.43
TRIM47-204ENST00000587339 RASD1Q9Y272 281 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 GRIP1Q9Y3R0 1128 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 TMEM14AQ9Y6G1 99 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 MED13Q9UHV7 2174 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 CNTRLQ7Z7A1 2325 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 ASPMQ8IZT6 3477 aa17.74■□□□□ 0.43
TRIM47-204ENST00000587339 WT1P19544 449 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-204ENST00000587339 SOX6P35712 828 aa17.73■□□□□ 0.43
TRIM47-204ENST00000587339 CLDN20P56880 219 aa17.73■□□□□ 0.43
TRIM47-204ENST00000587339 FMODQ06828 376 aa17.73■□□□□ 0.43
TRIM47-204ENST00000587339 MOGQ16653 247 aa17.73■□□□□ 0.43
TRIM47-204ENST00000587339 ZNF404Q494X3 552 aa17.73■□□□□ 0.43
TRIM47-204ENST00000587339 HDDC2Q7Z4H3 204 aa17.73■□□□□ 0.43
TRIM47-204ENST00000587339 MCFD2Q8NI22 146 aa17.73■□□□□ 0.43
TRIM47-204ENST00000587339 CCDC86Q9H6F5 360 aaKnown RBP17.73■□□□□ 0.43
TRIM47-204ENST00000587339 ZNF703Q9H7S9 590 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-204ENST00000587339 ACOXLQ9NUZ1 547 aa17.73■□□□□ 0.43
TRIM47-204ENST00000587339 COA3Q9Y2R0 106 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-204ENST00000587339 KLHDC2Q9Y2U9 406 aa17.73■□□□□ 0.43
TRIM47-204ENST00000587339 KLF13Q9Y2Y9 288 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-204ENST00000587339 CEP250Q9BV73 2442 aa17.73■□□□□ 0.43
TRIM47-204ENST00000587339 CENPBD1B2RD01 187 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 PSMD9O00233 223 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 SP1P08047 785 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 CD53P19397 219 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 RFC3P40938 356 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 MFAP5Q13361 173 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 SLC25A25Q6KCM7 469 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 PLEKHG7Q6ZR37 379 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 LINC00299Q6ZSB3 139 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 MDS2Q8NDY4 140 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 SLC25A44Q96H78 314 aaPredicted RBP17.72■□□□□ 0.43
TRIM47-204ENST00000587339 DACH2Q96NX9 599 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 NAA11Q9BSU3 229 aaPredicted RBP17.72■□□□□ 0.43
TRIM47-204ENST00000587339 MRPL13Q9BYD1 178 aaKnown RBP17.72■□□□□ 0.43
TRIM47-204ENST00000587339 GALNT8Q9NY28 637 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 SLC35F4A4IF30 521 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 TRABD2BA6NFA1 517 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 H0YC42 278 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 ZNF593O00488 134 aaPredicted RBP17.72■□□□□ 0.43
TRIM47-204ENST00000587339 GABRPO00591 440 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 EIF1AYO14602 144 aaKnown RBP17.72■□□□□ 0.43
TRIM47-204ENST00000587339 VAMP5O95183 116 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 ALOX5APP20292 161 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 GALP22466 123 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 RPS19P39019 145 aaKnown RBP17.72■□□□□ 0.43
TRIM47-204ENST00000587339 RPS27P42677 84 aaKnown RBP17.72■□□□□ 0.43
TRIM47-204ENST00000587339 CD97P48960 835 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 ENTPD1P49961 510 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 SIRPAP78324 504 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 SLC3A1Q07837 685 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 CLN3Q13286 438 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 TBC1D25Q3MII6 688 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 ZNF684Q5T5D7 378 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 GALNTL5Q7Z4T8 443 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 KCTD20Q7Z5Y7 419 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 OTOSQ8NHW6 89 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 THEM6Q8WUY1 208 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 RBP7Q96R05 134 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 DCLRE1CQ96SD1 692 aaKnown RBP17.72■□□□□ 0.43
TRIM47-204ENST00000587339 TTTY12Q9BZ98 90 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 ZNF552Q9H707 407 aaPredicted RBP17.72■□□□□ 0.43
TRIM47-204ENST00000587339 SIAEQ9HAT2 523 aa17.72■□□□□ 0.43
TRIM47-204ENST00000587339 MRPL22Q9NWU5 206 aaKnown RBP17.72■□□□□ 0.43
TRIM47-204ENST00000587339 IGHV3-15A0A0B4J1V0 119 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 METTL15A6NJ78 407 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 KLRC4-KLRK1H3BQV0 150 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 DNPH1O43598 174 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 NME2P1O60361 137 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 IGHG1P01857 330 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 TACSTD2P09758 323 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 CD46P15529 392 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 POU3F2P20265 443 aaPredicted RBP17.71■□□□□ 0.43
TRIM47-204ENST00000587339 NME2P22392 152 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 GFRA1P56159 465 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 CLRN1P58418 232 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 RAC3P60763 192 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 ADAM8P78325 824 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 ARG2P78540 354 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 NHLH1Q02575 133 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 CAMK2DQ13557 499 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 CCDC58Q4VC31 144 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 DMKNQ6E0U4 476 aaPredicted RBP17.71■□□□□ 0.43
TRIM47-204ENST00000587339 ESPNLQ6ZVH7 1005 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.71■□□□□ 0.43
TRIM47-204ENST00000587339 GGNQ86UU5 652 aa17.71■□□□□ 0.43
TRIM47-204ENST00000587339 UBQLNLQ8IYU4 475 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms