RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CXCR1P25024 350 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 PSMB9P28065 219 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 NOS3P29474 1203 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 HTR1FP30939 366 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 SERPINB10P48595 397 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 MASP1P48740 699 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 POLR2HP52434 150 aaKnown RBP6.98□□□□□ -1.29
VMP1-204ENST00000587259 CDH11P55287 796 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 ACTC1P68032 377 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 ACTA1P68133 377 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 EFNB1P98172 346 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 ZNF117Q03924 483 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 LGALS3BPQ08380 585 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 FAM27E3Q08E93 113 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 CD226Q15762 336 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 SMN1Q16637 294 aaKnown RBP6.98□□□□□ -1.29
VMP1-204ENST00000587259 TIGD6Q17RP2 521 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 LCN1P1Q5VSP4 162 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 GPR107Q5VW38 600 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 SLC30A6Q6NXT4 461 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 WDR88Q6ZMY6 472 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 DPY19L2P2Q6ZN68 376 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 LINC00299Q6ZSB3 139 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 C22orf34Q6ZV56 151 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 P2RY8Q86VZ1 359 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 MAPK1IP1LQ8NDC0 245 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 FAM83FQ8NEG4 500 aaPredicted RBP6.98□□□□□ -1.29
VMP1-204ENST00000587259 PROKR2Q8NFJ6 384 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 OR6S1Q8NH40 331 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 PFN4Q8NHR9 129 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 MBD3L2Q8NHZ7 208 aaPredicted RBP6.98□□□□□ -1.29
VMP1-204ENST00000587259 ZFAND2BQ8WV99 257 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 ABTB1Q969K4 478 aaPredicted RBP6.98□□□□□ -1.29
VMP1-204ENST00000587259 MRPL48Q96GC5 212 aaKnown RBP6.98□□□□□ -1.29
VMP1-204ENST00000587259 COG8Q96MW5 612 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 ZNF582Q96NG8 517 aaPredicted RBP6.98□□□□□ -1.29
VMP1-204ENST00000587259 GPX7Q96SL4 187 aaPredicted RBP6.98□□□□□ -1.29
VMP1-204ENST00000587259 GPA33Q99795 319 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 IFT27Q9BW83 186 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 JAM3Q9BX67 310 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 PLA2G12AQ9BZM1 189 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 FKRPQ9H9S5 495 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 UBTD1Q9HAC8 227 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 FGF20Q9NP95 211 aaPredicted RBP6.98□□□□□ -1.29
VMP1-204ENST00000587259 NANSQ9NR45 359 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 CMC2Q9NRP2 79 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 QPCTLQ9NXS2 382 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 ENPP5Q9UJA9 477 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 ZNF229Q9UJW7 825 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 EDARQ9UNE0 448 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 CARD8Q9Y2G2 431 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 SPIN1Q9Y657 262 aaPredicted RBP6.98□□□□□ -1.29
VMP1-204ENST00000587259 COL6A5A8TX70 2615 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 ARID1AO14497 2285 aa6.98□□□□□ -1.29
VMP1-204ENST00000587259 TRAV36DV7A0A075B6V5 113 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 IGLV3-32A0A0A0MS00 114 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 TMEM129A0AVI4 362 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 CD8B2A6NJW9 211 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 B4DXG7 233 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 PRR23D1E9PI22 279 aaPredicted RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 H3BSA7 217 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 BHLHE40O14503 412 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 CDC42EP2O14613 210 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 IMPA2O14732 288 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 ARPC3O15145 178 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 FADS1O60427 444 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 SMPD2O60906 423 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 HIST1H2ABP04908 130 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 PRR23D2P0DMB1 279 aaPredicted RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 MAKP20794 623 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 FUT4P22083 530 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 PTGDSP41222 190 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 APOBEC1P41238 236 aaKnown RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 CASP3P42574 277 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 ZNF41P51814 821 aaPredicted RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 NUDT6P53370 316 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 GP2P55259 537 aaKnown RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 RPS4XP62701 263 aaKnown RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 DYNC1I2Q13409 638 aaKnown RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 IRF3Q14653 427 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 CLEC12AQ5QGZ9 265 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 GPR139Q6DWJ6 353 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 OR5M10Q6IEU7 315 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 ACSM5Q6NUN0 579 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 HIST3H2AQ7L7L0 130 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 CXXC5Q7LFL8 322 aaKnown RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 IQCF1Q8N6M8 205 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 GATSQ8NAP1 163 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 OR8D4Q8NGM9 314 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 OR13C2Q8NGS9 318 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 STK35Q8TDR2 534 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 RNF138Q8WVD3 245 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 HIST1H2ACQ93077 130 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 UBE2FQ969M7 185 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 TMIGD2Q96BF3 282 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 C12orf43Q96C57 262 aaKnown RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 NMD3Q96D46 503 aaKnown RBP6.97□□□□□ -1.29
VMP1-204ENST00000587259 PIK3IP1Q96FE7 263 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 LRRC46Q96FV0 321 aa6.97□□□□□ -1.29
VMP1-204ENST00000587259 ZC3HAV1LQ96H79 300 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms