RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 TMEM33P57088 247 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 RBBP4Q09028 425 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 NKPD1Q17RQ9 610 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 LRFN4Q6PJG9 635 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 DHDDSQ86SQ9 333 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 PAQR4Q8N4S7 273 aaPredicted RBP16.57■□□□□ 0.24
TRAF4-216ENST00000586813 LRRC17Q8N6Y2 441 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 SEMA6DQ8NFY4 1073 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 ADAMTS16Q8TE57 1224 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 SLC25A44Q96H78 314 aaPredicted RBP16.57■□□□□ 0.24
TRAF4-216ENST00000586813 SH3GL3Q99963 347 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 NANSQ9NR45 359 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 TREM2Q9NZC2 230 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 GRIP1Q9Y3R0 1128 aa16.57■□□□□ 0.24
TRAF4-216ENST00000586813 SLC22A23A1A5C7 686 aa16.56■□□□□ 0.24
TRAF4-216ENST00000586813 M0QX08 132 aa16.56■□□□□ 0.24
TRAF4-216ENST00000586813 KPNA4O00629 521 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-216ENST00000586813 VENTXO95231 258 aa16.56■□□□□ 0.24
TRAF4-216ENST00000586813 FARS2O95363 451 aaKnown RBP16.56■□□□□ 0.24
TRAF4-216ENST00000586813 MAGEB1P43366 347 aa16.56■□□□□ 0.24
TRAF4-216ENST00000586813 MTPNP58546 118 aa16.56■□□□□ 0.24
TRAF4-216ENST00000586813 ALKBH6Q3KRA9 238 aa16.56■□□□□ 0.24
TRAF4-216ENST00000586813 BEND6Q5SZJ8 279 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-216ENST00000586813 TTC33Q6PID6 262 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-216ENST00000586813 TSPYL5Q86VY4 417 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-216ENST00000586813 RBM45Q8IUH3 476 aaKnown RBP16.56■□□□□ 0.24
TRAF4-216ENST00000586813 OR4D11Q8NGI4 311 aa16.56■□□□□ 0.24
TRAF4-216ENST00000586813 OR51F2Q8NH61 342 aa16.56■□□□□ 0.24
TRAF4-216ENST00000586813 VANGL1Q8TAA9 524 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-216ENST00000586813 ZNF426Q9BUY5 554 aa16.56■□□□□ 0.24
TRAF4-216ENST00000586813 TAAR3PQ9P1P4 343 aa16.56■□□□□ 0.24
TRAF4-216ENST00000586813 LEF1Q9UJU2 399 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-216ENST00000586813 ZNF229Q9UJW7 825 aa16.56■□□□□ 0.24
TRAF4-216ENST00000586813 SLC7A7Q9UM01 511 aa16.56■□□□□ 0.24
TRAF4-216ENST00000586813 A0A0A6YYJ9 748 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 TRAPPC13A5PLN9 417 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 C17orf100A8MU93 164 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 DHHO43323 396 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 CLPTM1O96005 669 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 CCL2P13500 99 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 KLF3P57682 345 aaPredicted RBP16.55■□□□□ 0.24
TRAF4-216ENST00000586813 LMO4P61968 165 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 SELPLGQ14242 412 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 AGBL2Q5U5Z8 902 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 TMEM53Q6P2H8 277 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 SHQ1Q6PI26 577 aaKnown RBP16.55■□□□□ 0.24
TRAF4-216ENST00000586813 DPPA2Q7Z7J5 298 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 OR4K5Q8NGD3 323 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 MPP4Q96JB8 637 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 LRRC37BQ96QE4 947 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 TSPAN32Q96QS1 320 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 SLC19A3Q9BZV2 496 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 OR51B6Q9H340 312 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 C1orf198Q9H425 327 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 CDH20Q9HBT6 801 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 GPR160Q9UJ42 338 aa16.55■□□□□ 0.24
TRAF4-216ENST00000586813 TENM1Q9UKZ4 2725 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 IGLV3-9A0A075B6K5 115 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 SNAP29O95721 258 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 IGHG1P01857 330 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 QDPRP09417 244 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 ASAH2BP0C7U1 165 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 ZNF250P15622 560 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 SELENOVP59797 346 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 ERVS71-1P61550 626 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 SCGB2A2Q13296 93 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 SLC36A2Q495M3 483 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 NRN1LQ496H8 165 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 C12orf54Q6X4T0 127 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 NANOGNBQ7Z5D8 188 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 SLC30A8Q8IWU4 369 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 DPP10Q8N608 796 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 SYNPRQ8TBG9 265 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 ZFAND2BQ8WV99 257 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 CGREF1Q99674 301 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 PCDHAC1Q9H158 963 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 RABEP2Q9H5N1 569 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 RNF121Q9H920 327 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 HINT3Q9NQE9 182 aaKnown RBP16.54■□□□□ 0.24
TRAF4-216ENST00000586813 NDUFAF1Q9Y375 327 aa16.54■□□□□ 0.24
TRAF4-216ENST00000586813 TRAV20A0A0B4J274 112 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 CDC14BO60729 498 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 HIST1H2ABP04908 130 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 UMPSP11172 480 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 CD247P20963 164 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 CLRN1P58418 232 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 CCL8P80075 99 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 HIST3H3Q16695 136 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 TBC1D28Q2M2D7 210 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 TMEM154Q6P9G4 183 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 HIST3H2AQ7L7L0 130 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 SLC16A14Q7RTX9 510 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 PATL1Q86TB9 770 aaKnown RBP16.53■□□□□ 0.24
TRAF4-216ENST00000586813 RETREG3Q86VR2 466 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 ZNF519Q8TB69 540 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 SNX33Q8WV41 574 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 HIST1H2ACQ93077 130 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 MCHR2Q969V1 340 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 TAMM41Q96BW9 452 aa16.53■□□□□ 0.24
TRAF4-216ENST00000586813 ZNF347Q96SE7 839 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms