RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZP4Q12836 540 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 NPTX1Q15818 432 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 LRIF1Q5T3J3 769 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 DCAF12L2Q5VW00 463 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 NXNQ6DKJ4 435 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 ZNF771Q7L3S4 317 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-225ENST00000586385 FUNDC1Q8IVP5 155 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 OR5J2Q8NH18 312 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 OR6X1Q8NH79 312 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 SYNPRQ8TBG9 265 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 MGARPQ8TDB4 240 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 JMJD8Q96S16 334 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 EPYCQ99645 322 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 TMEM43Q9BTV4 400 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 CACYBPQ9HB71 228 aaKnown RBP10.09□□□□□ -0.79
BRCA1-225ENST00000586385 THAP1Q9NVV9 213 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 TAS2R5Q9NYW4 299 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 FBXL3Q9UKT7 428 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 PPIAL4AQ9Y536 164 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 ARHGAP32A7KAX9 2087 aa10.09□□□□□ -0.79
BRCA1-225ENST00000586385 WNK2Q9Y3S1 2297 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 TMEM247A6NEH6 219 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 DHHO43323 396 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 MFN2O95140 757 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 SNAP29O95721 258 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 PGA4P0DJD7 388 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 PGA3P0DJD8 388 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 OR8G3PP0DMU2 310 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 ANPEPP15144 967 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 UCP2P55851 309 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 RGS8P57771 180 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-225ENST00000586385 CDK6Q00534 326 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 RBBP4Q09028 425 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 MELKQ14680 651 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 PCGF3Q3KNV8 242 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 MMEL1Q495T6 779 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 PDLIM3Q53GG5 364 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-225ENST00000586385 GCNT6Q5T4J0 391 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 REEP3Q6NUK4 255 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 TMEM154Q6P9G4 183 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 SLC35D2Q76EJ3 337 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 TEX29Q8N6K0 151 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 LRRC17Q8N6Y2 441 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 ANKRD42Q8N9B4 389 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 CPEB3Q8NE35 698 aaKnown RBP10.08□□□□□ -0.8
BRCA1-225ENST00000586385 DEFB108BQ8NET1 73 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 BHLHE22Q8NFJ8 381 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-225ENST00000586385 OR4K5Q8NGD3 323 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 ZNF519Q8TB69 540 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 NANPQ8TBE9 248 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 TAF15Q92804 592 aaKnown RBP eCLIP10.08□□□□□ -0.86e-6■□□□□ 11.2
BRCA1-225ENST00000586385 RAB39BQ96DA2 213 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 PAIP2Q9BPZ3 127 aaKnown RBP10.08□□□□□ -0.8
BRCA1-225ENST00000586385 C7orf69Q9H7B7 122 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 KCNK9Q9NPC2 374 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 DCAF16Q9NXF7 216 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 VAPAQ9P0L0 249 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 LEF1Q9UJU2 399 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-225ENST00000586385 GMEB1Q9Y692 573 aa10.08□□□□□ -0.8
BRCA1-225ENST00000586385 TGP01266 2768 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 ZSCAN5BA6NJL1 495 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 C5orf58C9J3I9 102 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 M0R3H8 397 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 UBDO15205 165 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 UBOX5O94941 541 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 BCL10O95999 233 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 MT-ATP6P00846 226 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 IGHV1-46P01743 117 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 IGHV3-13P01766 116 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 LCKP06239 509 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 ADORA3P0DMS8 318 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 AQP1P29972 269 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 MPV17P39210 176 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 WNT5AP41221 380 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 MMP15P51511 669 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 LCN2P80188 198 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 ZNF74Q16587 644 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 HIST3H3Q16695 136 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 TSTQ16762 297 aaKnown RBP10.07□□□□□ -0.8
BRCA1-225ENST00000586385 KLF17Q5JT82 389 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-225ENST00000586385 PAGE3Q5JUK9 113 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 SWT1Q5T5J6 900 aaKnown RBP10.07□□□□□ -0.8
BRCA1-225ENST00000586385 WDR93Q6P2C0 686 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 SHISA2Q6UWI4 295 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 SNX32Q86XE0 403 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 ZNF101Q8IZC7 436 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 BCL6BQ8N143 479 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-225ENST00000586385 BPIFB2Q8N4F0 458 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 C10orf53Q8N6V4 93 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 SIGLECL1Q8N7X8 197 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 GPR32P1Q8NGA4 272 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 OR4D11Q8NGI4 311 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 ZNF48Q96MX3 618 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-225ENST00000586385 DUX5Q96PT3 197 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 SEPHS2Q99611 448 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 RAD21L1Q9H4I0 556 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 TMEM27Q9HBJ8 222 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 CDH20Q9HBT6 801 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 MMP26Q9NRE1 261 aa10.07□□□□□ -0.8
BRCA1-225ENST00000586385 SLCO1C1Q9NYB5 712 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms