RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 VSX1Q9NZR4 365 aaPredicted RBP12.02□□□□□ -0.49
VMP1-203ENST00000586245 NCOA6Q14686 2063 aaPredicted RBP12.01□□□□□ -0.49
VMP1-203ENST00000586245 INTS1Q8N201 2190 aaKnown RBP12.01□□□□□ -0.49
VMP1-203ENST00000586245 SLC22A23A1A5C7 686 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 WIPF3A6NGB9 483 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 H7C1C5 153 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 SNAP29O95721 258 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 ZNF3P17036 446 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 POLR2IP36954 125 aaKnown RBP12.01□□□□□ -0.49
VMP1-203ENST00000586245 CD79BP40259 229 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 CDKN2AP42771 156 aaKnown RBP12.01□□□□□ -0.49
VMP1-203ENST00000586245 ZNF84P51523 738 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 LCN6P62502 163 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 TGFBR3Q03167 851 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 SRSF1Q07955 248 aaKnown RBP eCLIP12.01□□□□□ -0.49
VMP1-203ENST00000586245 P2RY6Q15077 328 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 CDSNQ15517 529 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 HIST3H3Q16695 136 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 FBXL19-AS1Q494R0 122 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 PHYHD1Q5SRE7 291 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 C9orf135Q5VTT2 229 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 SLX4IPQ5VYV7 408 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 DNM1P34Q6PK57 102 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 PTCHD4Q6ZW05 846 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 GABRG1Q8N1C3 465 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 ZNF555Q8NEP9 628 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 RNASE6Q93091 150 aaKnown RBP12.01□□□□□ -0.49
VMP1-203ENST00000586245 MCHR2Q969V1 340 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 SNX18Q96RF0 628 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 MBOAT4Q96T53 435 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 NMNAT3Q96T66 252 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 CRLF2Q9HC73 371 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 GALNT8Q9NY28 637 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 TAS2R16Q9NYV7 291 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 TVP23BQ9NYZ1 205 aa12.01□□□□□ -0.49
VMP1-203ENST00000586245 UBR5O95071 2799 aaPredicted RBP12□□□□□ -0.49
VMP1-203ENST00000586245 CIB4A0PJX0 185 aa12□□□□□ -0.49
VMP1-203ENST00000586245 RPL36A-HNRNPH2H7BZ11 118 aa12□□□□□ -0.49
VMP1-203ENST00000586245 SURF4O15260 269 aa12□□□□□ -0.49
VMP1-203ENST00000586245 DHHO43323 396 aa12□□□□□ -0.49
VMP1-203ENST00000586245 PAICSP22234 425 aaKnown RBP12□□□□□ -0.49
VMP1-203ENST00000586245 IGHV1-2P23083 117 aa12□□□□□ -0.49
VMP1-203ENST00000586245 IL32P24001 234 aa12□□□□□ -0.49
VMP1-203ENST00000586245 EPHA2P29317 976 aa12□□□□□ -0.49
VMP1-203ENST00000586245 CRABP1P29762 137 aa12□□□□□ -0.49
VMP1-203ENST00000586245 PTDSS1P48651 473 aaKnown RBP12□□□□□ -0.49
VMP1-203ENST00000586245 CDC42P60953 191 aa12□□□□□ -0.49
VMP1-203ENST00000586245 STK11Q15831 433 aa12□□□□□ -0.49
VMP1-203ENST00000586245 SNAPC1Q16533 368 aa12□□□□□ -0.49
VMP1-203ENST00000586245 CEACAM16Q2WEN9 425 aa12□□□□□ -0.49
VMP1-203ENST00000586245 FBXW10Q5XX13 1052 aa12□□□□□ -0.49
VMP1-203ENST00000586245 LINGO2Q7L985 606 aa12□□□□□ -0.49
VMP1-203ENST00000586245 CXorf67Q86X51 503 aaPredicted RBP12□□□□□ -0.49
VMP1-203ENST00000586245 SLC37A3Q8NCC5 494 aa12□□□□□ -0.49
VMP1-203ENST00000586245 NPEPL1Q8NDH3 523 aa12□□□□□ -0.49
VMP1-203ENST00000586245 NRG4Q8WWG1 115 aa12□□□□□ -0.49
VMP1-203ENST00000586245 KISS1RQ969F8 398 aaPredicted RBP12□□□□□ -0.49
VMP1-203ENST00000586245 HDHD5Q9BXW7 423 aa12□□□□□ -0.49
VMP1-203ENST00000586245 GRIP2Q9C0E4 1043 aa12□□□□□ -0.49
VMP1-203ENST00000586245 SYT4Q9H2B2 425 aa12□□□□□ -0.49
VMP1-203ENST00000586245 RERGLQ9H628 205 aa12□□□□□ -0.49
VMP1-203ENST00000586245 DIDO1Q9BTC0 2240 aaKnown RBP12□□□□□ -0.49
VMP1-203ENST00000586245 MYO18BQ8IUG5 2567 aa12□□□□□ -0.49
VMP1-203ENST00000586245 CLEC18AA5D8T8 446 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 C16orf97H3BN30 126 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 SLC16A7O60669 478 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 LYZL6O75951 148 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 SLC2A10O95528 541 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 ITGA5P08648 1049 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 PSMB1P20618 241 aaKnown RBP11.99□□□□□ -0.49
VMP1-203ENST00000586245 COX5AP20674 150 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 GUCA1AP43080 201 aaPredicted RBP11.99□□□□□ -0.49
VMP1-203ENST00000586245 PCYT1AP49585 367 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 ZNF133P52736 654 aaPredicted RBP11.99□□□□□ -0.49
VMP1-203ENST00000586245 SH3BGRP55822 239 aaPredicted RBP11.99□□□□□ -0.49
VMP1-203ENST00000586245 FMODQ06828 376 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 FAM27E3Q08E93 113 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 CRMP1Q14194 572 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 C10orf128Q5T292 105 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 SFRP5Q5T4F7 317 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 C12orf73Q69YU5 71 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 LRFN4Q6PJG9 635 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 SLC25A47Q6Q0C1 308 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 CLEC18BQ6UXF7 455 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 STAC2Q6ZMT1 411 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 BHLHA15Q7RTS1 189 aaPredicted RBP11.99□□□□□ -0.49
VMP1-203ENST00000586245 DHRSXQ8N5I4 330 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 ZNF433Q8N7K0 673 aaPredicted RBP11.99□□□□□ -0.49
VMP1-203ENST00000586245 CYB561A3Q8NBI2 242 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 CLEC18CQ8NCF0 446 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 NSMAFQ92636 917 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 OTULINQ96BN8 352 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 NUAK2Q9H093 628 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 SRA1Q9HD15 236 aaKnown RBP11.99□□□□□ -0.49
VMP1-203ENST00000586245 RPRD1BQ9NQG5 326 aaKnown RBP11.99□□□□□ -0.49
VMP1-203ENST00000586245 FAM118AQ9NWS6 357 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 IMPAD1Q9NX62 359 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 GPR52Q9Y2T5 361 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 GMPPBQ9Y5P6 360 aa11.99□□□□□ -0.49
VMP1-203ENST00000586245 PCNX1Q96RV3 2341 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms