RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 TBX5Q99593 518 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 KLHDC3Q9BQ90 382 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 TTYH2Q9BSA4 534 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 RHNO1Q9BSD3 238 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 HES7Q9BYE0 225 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 YIPF3Q9GZM5 350 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SLC6A15Q9H2J7 730 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 KCNN2Q9H2S1 579 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 ADGRL4Q9HBW9 690 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 PROK2Q9HC23 129 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SRA1Q9HD15 236 aaKnown RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 ACKR4Q9NPB9 350 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 EXOSC4Q9NPD3 245 aaKnown RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 ISYNA1Q9NPH2 558 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 ERVK13-1Q9NX77 482 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 PTTG2Q9NZH5 202 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 VSX1Q9NZR4 365 aaPredicted RBP5.54□□□□□ -1.52
LIG3-206ENST00000586058 IKZF2Q9UKS7 526 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 SSR3Q9UNL2 185 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 CAMK2AQ9UQM7 478 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 RCE1Q9Y256 329 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 GSTK1Q9Y2Q3 226 aa5.54□□□□□ -1.52
LIG3-206ENST00000586058 MYO15AQ9UKN7 3530 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 A0A0J9YW62 118 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 LOC100506127A0A0U1RQW1 187 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 LOC102725191A0A1B0GVB3 256 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 SLC22A23A1A5C7 686 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 PINLYPA6NC86 204 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 CCDC182A6NF36 153 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 MS4A18H0YCH9 400 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 GLSO94925 669 aaPredicted RBP5.53□□□□□ -1.52
LIG3-206ENST00000586058 PTHP01270 115 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 SCG5P05408 212 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 LCKP06239 509 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 SPARCP09486 303 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 RFPL3SP0C7P2 107 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 CLUP10909 449 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 ZNF16P17020 682 aaPredicted RBP5.53□□□□□ -1.52
LIG3-206ENST00000586058 PYCR1P32322 319 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 CDKN2AP42771 156 aaKnown RBP5.53□□□□□ -1.52
LIG3-206ENST00000586058 CD97P48960 835 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 ENTPD1P49961 510 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 GP2P55259 537 aaKnown RBP5.53□□□□□ -1.52
LIG3-206ENST00000586058 GFRA1P56159 465 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 CLDN15P56746 228 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 EGR3Q06889 387 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 RASGEF1BQ0VAM2 473 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 FOXO1Q12778 655 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 CAMK2DQ13557 499 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 FHL1Q13642 323 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 EIF2B1Q14232 305 aaKnown RBP5.53□□□□□ -1.52
LIG3-206ENST00000586058 IRF3Q14653 427 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 BCL2A1Q16548 175 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 MS4A18Q3C1V0 323 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 CARD17Q5XLA6 110 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 ABLIM2Q6H8Q1 611 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 SLC18B1Q6NT16 456 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 IGFL3Q6UXB1 125 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 KCTD20Q7Z5Y7 419 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 KRT77Q7Z794 578 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 LHFPL3Q86UP9 236 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 ZNF227Q86WZ6 799 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 ANKRD13BQ86YJ7 626 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.53□□□□□ -1.52
LIG3-206ENST00000586058 ALDH16A1Q8IZ83 802 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 SYS1Q8N2H4 156 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 KDM8Q8N371 416 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 YIPF7Q8N8F6 280 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 SYT14Q8NB59 555 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 OR9K2Q8NGE7 335 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 OR51L1Q8NGJ5 315 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 SGCDQ92629 289 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 KISS1RQ969F8 398 aaPredicted RBP5.53□□□□□ -1.52
LIG3-206ENST00000586058 NTNG2Q96CW9 530 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 NMD3Q96D46 503 aaKnown RBP5.53□□□□□ -1.52
LIG3-206ENST00000586058 SIGLEC11Q96RL6 698 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 NPAS1Q99742 590 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 COQ7Q99807 217 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 FUNDC2Q9BWH2 189 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 HCAR1Q9BXC0 346 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 MROQ9BYG7 248 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 ULBP2Q9BZM5 246 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 NMNAT2Q9BZQ4 307 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 NUAK2Q9H093 628 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 COMMD4Q9H0A8 199 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 ENKD1Q9H0I2 346 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 WDR76Q9H967 626 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 SEC61A2Q9H9S3 476 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 PARPBPQ9NWS1 579 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 MED29Q9NX70 200 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 TAS2R16Q9NYV7 291 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 KLHL13Q9P2N7 655 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 KCNG2Q9UJ96 466 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 ENPP5Q9UJA9 477 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 GNG8Q9UK08 70 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 STUB1Q9UNE7 303 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 B3GNT3Q9Y2A9 372 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 HRH3Q9Y5N1 445 aa5.53□□□□□ -1.52
LIG3-206ENST00000586058 IGHV3-15A0A0B4J1V0 119 aa5.52□□□□□ -1.53
LIG3-206ENST00000586058 SLC35F4A4IF30 521 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms