RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 BDH1Q02338 343 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 IRF3Q14653 427 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 SF3B4Q15427 424 aaKnown RBP eCLIP11.26□□□□□ -0.61
VMP1-202ENST00000585847 HSPB2Q16082 182 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 ACKR1Q16570 336 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 SMN1Q16637 294 aaKnown RBP11.26□□□□□ -0.61
VMP1-202ENST00000585847 ZNF362Q5T0B9 420 aaPredicted RBP11.26□□□□□ -0.61
VMP1-202ENST00000585847 SEM1Q6ZVN7 128 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 CD163Q86VB7 1156 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 MEX3DQ86XN8 651 aaKnown RBP11.26□□□□□ -0.61
VMP1-202ENST00000585847 NPEPL1Q8NDH3 523 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 ATP6V1C2Q8NEY4 427 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 OR52N1Q8NH53 320 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 OR6X1Q8NH79 312 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 MOSPD2Q8NHP6 518 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 SMPDL3BQ92485 455 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 MUL1Q969V5 352 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 SARAFQ96BY9 339 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 RNFT2Q96EX2 444 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 TSPAN32Q96QS1 320 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 CNN2Q99439 309 aaKnown RBP11.26□□□□□ -0.61
VMP1-202ENST00000585847 ACOT13Q9NPJ3 140 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 PAK1IP1Q9NWT1 392 aaPredicted RBP11.26□□□□□ -0.61
VMP1-202ENST00000585847 GPR52Q9Y2T5 361 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 MYO7BQ6PIF6 2116 aa11.26□□□□□ -0.61
VMP1-202ENST00000585847 A0A1W2PNR3 127 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 ZNF99A8MXY4 864 aaPredicted RBP11.25□□□□□ -0.61
VMP1-202ENST00000585847 LRRN3E7EW58 273 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 GPR171O14626 319 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 TNFSF11O14788 317 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 SEC14L2O76054 403 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 GLCEO94923 617 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 IGHG1P01857 330 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 TPOP07202 933 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 HTR1AP08908 422 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 ZNF43P17038 809 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 SPI1P17947 270 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 KLK2P20151 261 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 PTNP21246 168 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 ENPP1P22413 925 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 AHCYP23526 432 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 SFTPDP35247 375 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 NUDT6P53370 316 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 SLC16A1P53985 500 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 TAS2R43P59537 309 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 ERVK-25P63136 954 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 EMX1Q04741 257 aaPredicted RBP11.25□□□□□ -0.61
VMP1-202ENST00000585847 SRYQ05066 204 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 STK11Q15831 433 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 HBMQ6B0K9 141 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 TMEM225Q6GV28 225 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 LEG1Q6P5S2 330 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 TMPRSS11AQ6ZMR5 421 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 NCCRP1Q6ZVX7 275 aaPredicted RBP11.25□□□□□ -0.61
VMP1-202ENST00000585847 SLC35D2Q76EJ3 337 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 PM20D2Q8IYS1 436 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 UBQLNLQ8IYU4 475 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 ACBD7Q8N6N7 88 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 OR9Q1Q8NGQ5 310 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 OR13F1Q8NGS4 319 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 UBE2FQ969M7 185 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 DGCR14Q96DF8 476 aaKnown RBP11.25□□□□□ -0.61
VMP1-202ENST00000585847 LGALS12Q96DT0 336 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 DNAJA3Q96EY1 480 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 ZNF845Q96IR2 970 aaPredicted RBP11.25□□□□□ -0.61
VMP1-202ENST00000585847 DDOQ99489 341 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 TEAD3Q99594 435 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 SRXN1Q9BYN0 137 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 SEC14L4Q9UDX3 406 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 IL20RAQ9UHF4 553 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 KCNG2Q9UJ96 466 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 TINAGQ9UJW2 476 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 CAMK2AQ9UQM7 478 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 ADAM18Q9Y3Q7 739 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 FAM215AQ9Y5M1 114 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 ICE1Q9Y2F5 2266 aa11.25□□□□□ -0.61
VMP1-202ENST00000585847 RP1L1Q8IWN7 2480 aaPredicted RBP11.25□□□□□ -0.61
VMP1-202ENST00000585847 NCOA6Q14686 2063 aaPredicted RBP11.24□□□□□ -0.61
VMP1-202ENST00000585847 NBPF19A0A087WUL8 3843 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 A1L4Q6 167 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 MT-ND2P03891 347 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 HRGP04196 525 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 F13BP05160 661 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 OR2T7P0C7T2 308 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 ABOP16442 354 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 CD53P19397 219 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 PCMT1P22061 227 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 ACVR1BP36896 505 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 CA7P43166 264 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 TMBIM6P55061 237 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 CDH15P55291 814 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 CARD18P57730 90 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 RPS7P62081 194 aaKnown RBP11.24□□□□□ -0.61
VMP1-202ENST00000585847 POU3F1Q03052 451 aaPredicted RBP11.24□□□□□ -0.61
VMP1-202ENST00000585847 GLO1Q04760 184 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 ACSM1Q08AH1 577 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 EIF2S3LQ2VIR3 472 aaKnown RBP11.24□□□□□ -0.61
VMP1-202ENST00000585847 THEM4Q5T1C6 240 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 SLC35F1Q5T1Q4 408 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 EEF1A1P5Q5VTE0 462 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms