RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 IKZF5Q9H5V7 419 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 NANSQ9NR45 359 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 FGFR1OP2Q9NVK5 253 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.87□□□□□ -0.35
VAPA-209ENST00000585042 DUSP13Q9UII6 198 aa12.87□□□□□ -0.35
VAPA-209ENST00000585042 ANK2Q01484 3957 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 IGLV3-9A0A075B6K5 115 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 CENPBD1B2RD01 187 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 LRRN3E7EW58 273 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 C11orf98E9PRG8 122 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 M0QX08 132 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 DHHO43323 396 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 SNAP29O95721 258 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 HIST1H2ABP04908 130 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 MSMBP08118 114 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 ZNF250P15622 560 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 RAD52P43351 418 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 ARFIP2P53365 341 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 SEC24CP53992 1094 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 TEKQ02763 1124 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 CCNIQ14094 377 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 ZNF74Q16587 644 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 DUSP7Q16829 419 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 RGS7BPQ6MZT1 257 aaPredicted RBP12.86□□□□□ -0.35
VAPA-209ENST00000585042 TMEM53Q6P2H8 277 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 WDR88Q6ZMY6 472 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 HIST3H2AQ7L7L0 130 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 LRP11Q86VZ4 500 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 WDFY1Q8IWB7 410 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 DPP10Q8N608 796 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 OR1J2Q8NGS2 313 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 OR51F2Q8NH61 342 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 TSPEARQ8WU66 669 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 HIST1H2ACQ93077 130 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 CPPED1Q9BRF8 314 aaPredicted RBP12.86□□□□□ -0.35
VAPA-209ENST00000585042 TMEM120AQ9BXJ8 343 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 BCL2L14Q9BZR8 327 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 PCDHAC1Q9H158 963 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 LRMDAQ9H2I8 198 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 ZNF275Q9NSD4 429 aaPredicted RBP12.86□□□□□ -0.35
VAPA-209ENST00000585042 TMEM38BQ9NVV0 291 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 HIF1ANQ9NWT6 349 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 SLCO1C1Q9NYB5 712 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 ZNF229Q9UJW7 825 aa12.86□□□□□ -0.35
VAPA-209ENST00000585042 TRAV20A0A0B4J274 112 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 TRAPPC13A5PLN9 417 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 DYNC1I1O14576 645 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 ANGPT2O15123 496 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 RNF13O43567 381 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 RP2O75695 350 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 GAAP10253 952 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 TCN1P20061 433 aaPredicted RBP12.85□□□□□ -0.35
VAPA-209ENST00000585042 AQP1P29972 269 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 LMO4P61968 165 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 MYBPC1Q00872 1141 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 HIST3H3Q16695 136 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 SLC36A2Q495M3 483 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 ENTPD8Q5MY95 495 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 USP43Q70EL4 1123 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 PATL1Q86TB9 770 aaKnown RBP12.85□□□□□ -0.35
VAPA-209ENST00000585042 PTOV1Q86YD1 416 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 SMYD1Q8NB12 490 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 SLC30A7Q8NEW0 376 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 OR6T1Q8NGN1 323 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 ZNF519Q8TB69 540 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 SYNPRQ8TBG9 265 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 ADAMTS16Q8TE57 1224 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 RASSF5Q8WWW0 418 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 C11orf40Q8WZ69 217 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 YIPF5Q969M3 257 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 ZNF426Q9BUY5 554 aa12.85□□□□□ -0.35
VAPA-209ENST00000585042 HINT3Q9NQE9 182 aaKnown RBP12.85□□□□□ -0.35
VAPA-209ENST00000585042 MYEF2Q9P2K5 600 aaKnown RBP12.85□□□□□ -0.35
VAPA-209ENST00000585042 LEF1Q9UJU2 399 aaPredicted RBP12.85□□□□□ -0.35
VAPA-209ENST00000585042 A0A1W2PPW3 197 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 C17orf100A8MU93 164 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 PPIHO43447 177 aaKnown RBP12.84□□□□□ -0.35
VAPA-209ENST00000585042 SERPINI2O75830 405 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 LYPD3O95274 346 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 CH25HO95992 272 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 BCL10O95999 233 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 IGF2P01344 180 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 QDPRP09417 244 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 ASAH2BP0C7U1 165 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 PGA4P0DJD7 388 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 PGA3P0DJD8 388 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 CRYBB2P43320 205 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 UCP2P55851 309 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 KLF3P57682 345 aaPredicted RBP12.84□□□□□ -0.35
VAPA-209ENST00000585042 PLP2Q04941 152 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 MAD2L1BPQ15013 274 aaPredicted RBP12.84□□□□□ -0.35
VAPA-209ENST00000585042 NKPD1Q17RQ9 610 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 TMEM154Q6P9G4 183 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 C12orf54Q6X4T0 127 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 RINLQ6ZS11 566 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 HDDC2Q7Z4H3 204 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 CARM1Q86X55 608 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 GPR32P1Q8NGA4 272 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 FGFBP3Q8TAT2 258 aa12.84□□□□□ -0.35
VAPA-209ENST00000585042 ZNF418Q8TF45 676 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms