RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-229	ENST00000583697	C8orf82	Q6P1X6	216 aa	Predicted RBP	7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	COMTD1	Q86VU5	262 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	C20orf196	Q8IYI0	205 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	C10orf111	Q8N326	155 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ZNF786	Q8N393	782 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	RNF148	Q8N7C7	305 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	OR5J2	Q8NH18	312 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	SLC26A7	Q8TE54	656 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	UBASH3B	Q8TF42	649 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	HPS1	Q92902	700 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	MRPL24	Q96A35	216 aa	Known RBP	7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	SLC41A3	Q96GZ6	507 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	MS4A3	Q96HJ5	214 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	LRR1	Q96L50	414 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	MOGAT1	Q96PD6	335 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	DOK1	Q99704	481 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	SYT3	Q9BQG1	590 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	TMEM43	Q9BTV4	400 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	MRPL37	Q9BZE1	423 aa	Known RBP	7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	MS4A5	Q9H3V2	200 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	IKZF5	Q9H5V7	419 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	DENND2D	Q9H6A0	471 aa	Predicted RBP	7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	PRPF19	Q9UMS4	504 aa	Known RBP	7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ARFGEF3	Q5TH69	2177 aa		7.52	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	FBN3	Q75N90	2809 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	CPSF4L	A6NMK7	179 aa	Known RBP	7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	LRRN3	E7EW58	273 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	C11orf98	E9PRG8	122 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697		M0R3H8	397 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	NME4	O00746	187 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	FARS2	O95363	451 aa	Known RBP	7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	HPR	P00739	348 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ADRA2A	P08913	450 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	UMPS	P11172	480 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ZNF14	P17017	642 aa	Predicted RBP	7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	NR4A1	P22736	598 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	MSX2	P35548	267 aa	Predicted RBP	7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	GLRX	P35754	106 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	GPR6	P46095	362 aa	Predicted RBP	7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	GIPR	P48546	466 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	GSK3B	P49841	420 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	CDH12	P55289	794 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	CDH15	P55291	814 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	BID	P55957	195 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	RAB1A	P62820	205 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	MELK	Q14680	651 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	TRIP10	Q15642	601 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	NKPD1	Q17RQ9	610 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	GLYAT	Q6IB77	296 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ZNF613	Q6PF04	617 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	TTC33	Q6PID6	262 aa	Predicted RBP	7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ZNF771	Q7L3S4	317 aa	Predicted RBP	7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	PXK	Q7Z7A4	578 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	GLCCI1	Q86VQ1	547 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	CALHM3	Q86XJ0	350 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	MICU2	Q8IYU8	434 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ZCCHC24	Q8N2G6	241 aa	Known RBP	7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	RFLNB	Q8N5W9	214 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	LINC01356	Q8N9X3	169 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	SMYD1	Q8NB12	490 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	VANGL1	Q8TAA9	524 aa	Predicted RBP	7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	SNX33	Q8WV41	574 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	MCHR1	Q99705	422 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	SOX7	Q9BT81	388 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ABCD2	Q9UBJ2	740 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	CD300A	Q9UGN4	299 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	TMEFF2	Q9UIK5	374 aa	Predicted RBP	7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ABCA1	O95477	2261 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ANK2	Q01484	3957 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	TLN2	Q9Y4G6	2542 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	CSPG4	Q6UVK1	2322 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	SVEP1	Q4LDE5	3571 aa		7.51	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	TMEM129	A0AVI4	362 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	SLC22A23	A1A5C7	686 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ERICH4	A6NGS2	130 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	FAM220BP	B1ANY3	271 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	MS4A18	H0YCH9	400 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697		M0QX08	132 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	CXCR6	O00574	342 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	KPNA4	O00629	521 aa	Predicted RBP	7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	PLPP3	O14495	311 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	RNF13	O43567	381 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	FMO6P	O60774	539 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	LILRA1	O75019	489 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	MFN2	O95140	757 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	HSD17B1	P14061	328 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ACHE	P22303	614 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	IL2RG	P31785	369 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	EVX1	P49640	407 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	GZMM	P51124	257 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	PCBP3	P57721	371 aa	Known RBP	7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	SRSF2	Q01130	221 aa	Known RBP	7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	TRIM25	Q14258	630 aa	Known RBP	7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	MS4A18	Q3C1V0	323 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ENTPD8	Q5MY95	495 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	RGS7BP	Q6MZT1	257 aa	Predicted RBP	7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	SHQ1	Q6PI26	577 aa	Known RBP	7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	ZNF627	Q7L945	461 aa		7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	PIWIL3	Q7Z3Z3	882 aa	Known RBP	7.5	□□□□□ -1.21
CDK5RAP3-229	ENST00000583697	NANOGNB	Q7Z5D8	188 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms