RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ENPEPQ07075 957 aa3.48□□□□□ -1.85
SMARCE1-219ENST00000583294 SSX2Q16385 188 aa3.48□□□□□ -1.85
SMARCE1-219ENST00000583294 MREGQ8N565 214 aa3.48□□□□□ -1.85
SMARCE1-219ENST00000583294 CEP112Q8N8E3 955 aa3.48□□□□□ -1.85
SMARCE1-219ENST00000583294 ZNF596Q8TC21 504 aa3.48□□□□□ -1.85
SMARCE1-219ENST00000583294 GPR61Q9BZJ8 451 aa3.48□□□□□ -1.85
SMARCE1-219ENST00000583294 IFI27L2Q9H2X8 130 aa3.48□□□□□ -1.85
SMARCE1-219ENST00000583294 TM9SF3Q9HD45 589 aa3.48□□□□□ -1.85
SMARCE1-219ENST00000583294 CSDC2Q9Y534 153 aaKnown RBP3.48□□□□□ -1.85
SMARCE1-219ENST00000583294 IGLV11-55A0A075B6I3 123 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 A0A0U1RQS6 177 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 HIDE1A8MVS5 230 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 DYNC1I1O14576 645 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 MAGEB4O15481 346 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 EIF3GO75821 320 aaKnown RBP eCLIP3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 SNX4O95219 450 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 AK4P27144 223 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 PBLDP30039 288 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 RPS9P46781 194 aaKnown RBP3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 TFPI2P48307 235 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 ATP5IP56385 69 aaPredicted RBP3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 GPX6P59796 221 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 TTLL9Q3SXZ7 439 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 TFDP3Q5H9I0 405 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 TMEM255AQ5JRV8 349 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 LYPD2Q6UXB3 125 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 ZNF836Q6ZNA1 936 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 NIPA1Q7RTP0 329 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 FAM228AQ86W67 206 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 KCNG3Q8TAE7 436 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 CD300LFQ8TDQ1 290 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 STARD4Q96DR4 205 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 PKIBQ9C010 78 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 TPK1Q9H3S4 243 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 RPF2Q9H7B2 306 aaKnown RBP3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 PATZ1Q9HBE1 687 aaKnown RBP3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 INPP5EQ9NRR6 644 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 NUP50Q9UKX7 468 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 TBX21Q9UL17 535 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 PSG11Q9UQ72 335 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 MYO10Q9HD67 2058 aa3.47□□□□□ -1.85
SMARCE1-219ENST00000583294 F6UB75 175 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 PALMO75781 387 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 NDUFB10O96000 172 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 PRB2P02812 416 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 SMIM10L1P0DMW3 83 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 TNNI1P19237 187 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 MAGP20916 626 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 LONP1P36776 959 aaKnown RBP3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 RFX3P48380 749 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 SLC7A9P82251 487 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 MRPS22P82650 360 aaKnown RBP3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 ECH1Q13011 328 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 ZNF691Q5VV52 312 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 TMEM107Q6UX40 140 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 H2AFVQ71UI9 128 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 STRADAQ7RTN6 431 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 TAS2R42Q7RTR8 314 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 CDR2LQ86X02 465 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 PCP2Q8IVA1 136 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 MS4A15Q8N5U1 240 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 EID2Q8N6I1 236 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 Q8N976 141 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 OR1S2Q8NGQ3 325 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 ZFP90Q8TF47 636 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 SMIM10Q96HG1 83 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 TPD52L3Q96J77 140 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 TSSK3Q96PN8 268 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 TCHPQ9BT92 498 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 PSMC3IPQ9P2W1 217 aaPredicted RBP3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 STARD10Q9Y365 291 aa3.46□□□□□ -1.86
SMARCE1-219ENST00000583294 SPAG7O75391 227 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 ZDHHC11BP0C7U3 371 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 CALM1P0DP23 149 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 CALM2P0DP24 149 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 CALM3P0DP25 149 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 FOLR1P15328 257 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 SERPINB5P36952 375 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 YWHAGP61981 247 aaKnown RBP eCLIP3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 ACTA2P62736 377 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 ACTG2P63267 376 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 ACTC1P68032 377 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 EBI3Q14213 229 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 ZSCAN26Q16670 478 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 CCDC73Q6ZRK6 1079 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 NCCRP1Q6ZVX7 275 aaPredicted RBP3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 C12orf56Q8IXR9 622 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 B3GNT7Q8NFL0 401 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 SLC2A14Q8TDB8 520 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 CXorf40AQ8TE69 158 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 STARD8Q92502 1023 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 N4BP2L2Q92802 583 aaPredicted RBP3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 BMFQ96LC9 184 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 SH3GL3Q99963 347 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 CWH43Q9H720 699 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 IKBKGQ9Y6K9 419 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 CNTNAP1P78357 1384 aa3.45□□□□□ -1.86
SMARCE1-219ENST00000583294 NOTCH2Q04721 2471 aa3.44□□□□□ -1.86
SMARCE1-219ENST00000583294 IGKV2D-24A0A075B6R9 120 aa3.44□□□□□ -1.86
SMARCE1-219ENST00000583294 XKRY2A2RUG3 117 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms