RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 VPREB3Q9UKI3 123 aa7.65□□□□□ -1.18
GGA3-212ENST00000582376 SNX12Q9UMY4 172 aa7.65□□□□□ -1.18
GGA3-212ENST00000582376 NUP214P35658 2090 aaPredicted RBP7.64□□□□□ -1.19
GGA3-212ENST00000582376 A0A096LPI6 279 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 IGHV1-69DA0A0B4J2H0 117 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 A0A0U1RQK1 487 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 FTCDNL1E5RQL4 147 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 RNASEK-C17orf49H0YIS7 233 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 AIM2O14862 343 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 ENSAO43768 121 aaKnown RBP7.64□□□□□ -1.19
GGA3-212ENST00000582376 NPIPB7O75200 414 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 ENTPD5O75356 428 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 AGR2O95994 175 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 IGHV1-69P01742 117 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 F13BP05160 661 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 GSTA1P08263 222 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 TNFRSF1AP19438 455 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 ATP5F1P24539 256 aaPredicted RBP7.64□□□□□ -1.19
GGA3-212ENST00000582376 MSX2P35548 267 aaPredicted RBP7.64□□□□□ -1.19
GGA3-212ENST00000582376 MPV17P39210 176 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 ANP32AP39687 249 aaKnown RBP7.64□□□□□ -1.19
GGA3-212ENST00000582376 EFNB2P52799 333 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 PRKAA2P54646 552 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 KRTAP10-11P60412 298 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 RPL38P63173 70 aaKnown RBP7.64□□□□□ -1.19
GGA3-212ENST00000582376 HPCAP84074 193 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 DCTN2Q13561 401 aaKnown RBP7.64□□□□□ -1.19
GGA3-212ENST00000582376 TMEM255AQ5JRV8 349 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 SPATA46Q5T0L3 261 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 THEM4Q5T1C6 240 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 LIPMQ5VYY2 423 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 SLC27A4Q6P1M0 643 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 TMEM53Q6P2H8 277 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 PIWIL3Q7Z3Z3 882 aaKnown RBP7.64□□□□□ -1.19
GGA3-212ENST00000582376 PTOV1Q86YD1 416 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 CADM2Q8N3J6 435 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 PIP4P2Q8N4L2 257 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 NATD1Q8N6N6 113 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 SPERTQ8NA61 448 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 OR8B3Q8NGG8 313 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 OR6N1Q8NGY5 312 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 PNPT1Q8TCS8 783 aaKnown RBP7.64□□□□□ -1.19
GGA3-212ENST00000582376 STK35Q8TDR2 534 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 ROPN1LQ96C74 230 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 L3HYPDHQ96EM0 354 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 NEIL1Q96FI4 390 aaPredicted RBP7.64□□□□□ -1.19
GGA3-212ENST00000582376 SAMD8Q96LT4 415 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 OR8B2Q96RD0 313 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 ARHGDIGQ99819 225 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 EMC6Q9BV81 110 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 GSTO2Q9H4Y5 243 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 RNF121Q9H920 327 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 MSL2Q9HCI7 577 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 ATAD3AQ9NVI7 634 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 SIGLEC9Q9Y336 463 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 TMED5Q9Y3A6 229 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 DNAH3Q8TD57 4116 aa7.64□□□□□ -1.19
GGA3-212ENST00000582376 IQCMA0A1B0GVH7 501 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 H3BQF6 201 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 TMEM178BH3BS89 294 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 TOX4O94842 621 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 TNFSF4P23510 183 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 EPHA3P29320 983 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 APLNRP35414 380 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 RPS5P46782 204 aaKnown RBP7.63□□□□□ -1.19
GGA3-212ENST00000582376 PITPNBP48739 271 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 COPZ1P61923 177 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 HBA1P69905 142 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 FUT5Q11128 374 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 RFTN2Q52LD8 501 aaPredicted RBP7.63□□□□□ -1.19
GGA3-212ENST00000582376 GPAT3Q53EU6 434 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 MBNL2Q5VZF2 373 aaKnown RBP7.63□□□□□ -1.19
GGA3-212ENST00000582376 ATG16L1Q676U5 607 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 WBP2NLQ6ICG8 309 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 C1orf122Q6ZSJ8 110 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 NLRC3Q7RTR2 1065 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 UEVLDQ8IX04 471 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 ZNF440Q8IYI8 595 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 MIER2Q8N344 545 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 SLC22A24Q8N4F4 322 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 CCNYL1Q8N7R7 359 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 WFDC9Q8NEX5 89 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 VPS37AQ8NEZ2 397 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 PTDSS2Q9BVG9 487 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 PPA2Q9H2U2 334 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 CLN8Q9UBY8 286 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 PRDM4Q9UKN5 801 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 PPP1R3CQ9UQK1 317 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 FAM96BQ9Y3D0 163 aa7.63□□□□□ -1.19
GGA3-212ENST00000582376 DYNC2H1Q8NCM8 4307 aaKnown RBP7.63□□□□□ -1.19
GGA3-212ENST00000582376 RNF103-CHMP3A0A140T963 221 aa7.62□□□□□ -1.19
GGA3-212ENST00000582376 LOC102725191A0A1B0GVB3 256 aa7.62□□□□□ -1.19
GGA3-212ENST00000582376 GOLGA6L6A8MZA4 724 aa7.62□□□□□ -1.19
GGA3-212ENST00000582376 ZNF879B4DU55 563 aa7.62□□□□□ -1.19
GGA3-212ENST00000582376 M0R082 166 aa7.62□□□□□ -1.19
GGA3-212ENST00000582376 FBXO24O75426 580 aa7.62□□□□□ -1.19
GGA3-212ENST00000582376 FARS2O95363 451 aaKnown RBP7.62□□□□□ -1.19
GGA3-212ENST00000582376 INHBAP08476 426 aa7.62□□□□□ -1.19
GGA3-212ENST00000582376 VSIG10L2P0DP72 767 aa7.62□□□□□ -1.19
GGA3-212ENST00000582376 NEFHP12036 1026 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms