RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 LNX2Q8N448 690 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 IQCF1Q8N6M8 205 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 PFN4Q8NHR9 129 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 HIST1H2ACQ93077 130 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 ISOC1Q96CN7 298 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 GMPPAQ96IJ6 420 aaPredicted RBP12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 SAMD8Q96LT4 415 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 SFXN3Q9BWM7 321 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 MND1Q9BWT6 205 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 RNF122Q9H9V4 155 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 CHST11Q9NPF2 352 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 PAK1IP1Q9NWT1 392 aaPredicted RBP12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 DNAJC27Q9NZQ0 273 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 KLHL9Q9P2J3 617 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 EXOSC1Q9Y3B2 195 aaKnown RBP12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 CORINQ9Y5Q5 1042 aa12.01□□□□□ -0.49
CSNK1D-220ENST00000581737 KDM4EB2RXH2 506 aaPredicted RBP12□□□□□ -0.49
CSNK1D-220ENST00000581737 H3BSA7 217 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 DVL2O14641 736 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 SMAD9O15198 467 aaKnown RBP12□□□□□ -0.49
CSNK1D-220ENST00000581737 SURF4O15260 269 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 AQP8O94778 261 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 IL18BPO95998 194 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 MT-ATP6P00846 226 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 IMPDH2P12268 514 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 PCMT1P22061 227 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 FUT4P22083 530 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 CTSSP25774 331 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 OPRM1P35372 400 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 RPS5P46782 204 aaKnown RBP12□□□□□ -0.49
CSNK1D-220ENST00000581737 CDH11P55287 796 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 EGR4Q05215 589 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 LGALS3BPQ08380 585 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 GPR107Q5VW38 600 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 ABLIM2Q6H8Q1 611 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 P2RY8Q86VZ1 359 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 ERI1Q8IV48 349 aaKnown RBP12□□□□□ -0.49
CSNK1D-220ENST00000581737 C10orf53Q8N6V4 93 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 ANKK1Q8NFD2 765 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 NMD3Q96D46 503 aaKnown RBP12□□□□□ -0.49
CSNK1D-220ENST00000581737 KTI12Q96EK9 354 aaPredicted RBP12□□□□□ -0.49
CSNK1D-220ENST00000581737 MRPL48Q96GC5 212 aaKnown RBP12□□□□□ -0.49
CSNK1D-220ENST00000581737 ZNF582Q96NG8 517 aaPredicted RBP12□□□□□ -0.49
CSNK1D-220ENST00000581737 SIGLEC11Q96RL6 698 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 GPA33Q99795 319 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 ASPNQ9BXN1 380 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 PLA2G12AQ9BZM1 189 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 CMC2Q9NRP2 79 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 EMC3Q9P0I2 261 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 ZNF629Q9UEG4 869 aaPredicted RBP12□□□□□ -0.49
CSNK1D-220ENST00000581737 DIMT1Q9UNQ2 313 aaKnown RBP12□□□□□ -0.49
CSNK1D-220ENST00000581737 SIGLEC7Q9Y286 467 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 EMC9Q9Y3B6 208 aa12□□□□□ -0.49
CSNK1D-220ENST00000581737 A0A0G2JNJ9 132 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 SLC22A31A6NKX4 558 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 PRR23D1E9PI22 279 aaPredicted RBP11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 SLC22A1O15245 554 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 PRKYO43930 277 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 CYTIPO60759 359 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 FZD7O75084 574 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 SS18L1O75177 396 aaPredicted RBP11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 VAMP5O95183 116 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 PRR23D2P0DMB1 279 aaPredicted RBP11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 MAKP20794 623 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 ATP6V1E1P36543 226 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 RPL4P36578 427 aaKnown RBP11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 SLC15A1P46059 708 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 MTNR1AP48039 350 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 H3F3AP84243 136 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 RASGEF1BQ0VAM2 473 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 POU4F2Q12837 409 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 TIGD6Q17RP2 521 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 SLC25A35Q3KQZ1 300 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 ACSM5Q6NUN0 579 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 WDR88Q6ZMY6 472 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 DPY19L2P2Q6ZN68 376 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 CXXC5Q7LFL8 322 aaKnown RBP11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 NANOGNBQ7Z5D8 188 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 CDH24Q86UP0 819 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 ANKRD13BQ86YJ7 626 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 GCNT2Q8N0V5 402 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 SCAIQ8N9R8 606 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 ADPRHL1Q8NDY3 354 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 OR8D4Q8NGM9 314 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 OR13C2Q8NGS9 318 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 CA5BP1Q8WTZ4 195 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 LIPHQ8WWY8 451 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 ROBO4Q8WZ75 1007 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 UBE2FQ969M7 185 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 TAAR8Q969N4 342 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 TMIGD2Q96BF3 282 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 INTS12Q96CB8 462 aaKnown RBP11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 SLC25A36Q96CQ1 311 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 DNAJA3Q96EY1 480 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 DOK1Q99704 481 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 PTDSS2Q9BVG9 487 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 FKRPQ9H9S5 495 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 NANSQ9NR45 359 aa11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 MRPS18AQ9NVS2 196 aaKnown RBP11.99□□□□□ -0.49
CSNK1D-220ENST00000581737 KLHL13Q9P2N7 655 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms