RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 HIF3AQ9Y2N7 669 aa16.9■□□□□ 0.3
SREBF1-220ENST00000581707 NAV3Q8IVL0 2385 aa16.9■□□□□ 0.3
SREBF1-220ENST00000581707 VSTM5A8MXK1 200 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 CENPBD1B2RD01 187 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 B9A039 149 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 GMNNO75496 209 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 TRMUO75648 421 aaKnown RBP16.89■□□□□ 0.29
SREBF1-220ENST00000581707 PDE5AO76074 875 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 PRSS23O95084 383 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 RAB36O95755 333 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 SAGP10523 405 aaPredicted RBP16.89■□□□□ 0.29
SREBF1-220ENST00000581707 ZNF14P17017 642 aaPredicted RBP16.89■□□□□ 0.29
SREBF1-220ENST00000581707 HOXB4P17483 251 aaPredicted RBP16.89■□□□□ 0.29
SREBF1-220ENST00000581707 MAKP20794 623 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 GIPRP48546 466 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 PTDSS1P48651 473 aaKnown RBP16.89■□□□□ 0.29
SREBF1-220ENST00000581707 SNRPD2P62316 118 aaKnown RBP16.89■□□□□ 0.29
SREBF1-220ENST00000581707 MYBPC1Q00872 1141 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 PRKCDQ05655 676 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 ALG10Q5BKT4 473 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 ARMC4Q5T2S8 1044 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 ZNF730Q6ZMV8 503 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 MEX3DQ86XN8 651 aaKnown RBP16.89■□□□□ 0.29
SREBF1-220ENST00000581707 RNF148Q8N7C7 305 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 MAPK1IP1LQ8NDC0 245 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 RBM15BQ8NDT2 890 aaKnown RBP16.89■□□□□ 0.29
SREBF1-220ENST00000581707 NOXO1Q8NFA2 376 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 ACOT11Q8WXI4 607 aaPredicted RBP16.89■□□□□ 0.29
SREBF1-220ENST00000581707 MCHR2Q969V1 340 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 POM121Q96HA1 1249 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 MS4A3Q96HJ5 214 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 SEPHS2Q99611 448 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 TXNIPQ9H3M7 391 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 ZNF442Q9H7R0 627 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 TAGLN3Q9UI15 199 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 ENPP4Q9Y6X5 453 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 HIVEP2P31629 2446 aa16.89■□□□□ 0.29
SREBF1-220ENST00000581707 A0A087WUU8 490 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 NPIPB13A6NJU9 1138 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 NPIPB4C9JG80 1138 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 DCTN3O75935 186 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 FARS2O95363 451 aaKnown RBP16.88■□□□□ 0.29
SREBF1-220ENST00000581707 PATE4P0C8F1 98 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 THBS4P35443 961 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 ZNF84P51523 738 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 EFNA4P52798 201 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 DSCR9P59020 149 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 DAG1Q14118 895 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 EFNB3Q15768 340 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 TBPL2Q6SJ96 375 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 CLEC2AQ6UVW9 174 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 MBOAT2Q6ZWT7 520 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 TSEN54Q7Z6J9 526 aaKnown RBP16.88■□□□□ 0.29
SREBF1-220ENST00000581707 CDK20Q8IZL9 346 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 SH3GL3Q99963 347 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 NMNAT1Q9HAN9 279 aaPredicted RBP16.88■□□□□ 0.29
SREBF1-220ENST00000581707 DCAF13Q9NV06 445 aaKnown RBP16.88■□□□□ 0.29
SREBF1-220ENST00000581707 ARL8BQ9NVJ2 186 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 FBXL3Q9UKT7 428 aa16.88■□□□□ 0.29
SREBF1-220ENST00000581707 FAM32AQ9Y421 112 aaKnown RBP16.88■□□□□ 0.29
SREBF1-220ENST00000581707 CR1P17927 2039 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 EFCAB9A8MZ26 197 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 F12P00748 615 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-220ENST00000581707 TCN1P20061 433 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-220ENST00000581707 NPR2P20594 1047 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 NR4A1P22736 598 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 RAB39AQ14964 217 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 TAF11Q15544 211 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 KRT80Q6KB66 452 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 RRM2BQ7LG56 351 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 OAFQ86UD1 273 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 PGAM4Q8N0Y7 254 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 FAM156AQ8NDB6 213 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 OR10H5Q8NGA6 315 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 OR4K5Q8NGD3 323 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 OR51A7Q8NH64 312 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 FGFBP3Q8TAT2 258 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 TNFRSF13CQ96RJ3 184 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 PLK3Q9H4B4 646 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 ANKRD19PQ9H560 264 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 GORASP2Q9H8Y8 452 aa16.87■□□□□ 0.29
SREBF1-220ENST00000581707 SAMD4AQ9UPU9 718 aaKnown RBP16.87■□□□□ 0.29
SREBF1-220ENST00000581707 FN1P02751 2386 aaKnown RBP16.87■□□□□ 0.29
SREBF1-220ENST00000581707 IGHV4-30-2A0A087WSY4 118 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 TRAV27A0A087WT01 109 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 ZNF35P13682 527 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 HSD17B1P14061 328 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 ZNF133P52736 654 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-220ENST00000581707 CTXN1P60606 82 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 RPL27P61353 136 aaKnown RBP16.86■□□□□ 0.29
SREBF1-220ENST00000581707 SNTB2Q13425 540 aaKnown RBP16.86■□□□□ 0.29
SREBF1-220ENST00000581707 TOP3AQ13472 1001 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-220ENST00000581707 ANKDD1AQ495B1 522 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 NRN1LQ496H8 165 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 DPPA2Q7Z7J5 298 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 ZNF525Q8N782 197 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 OR13C2Q8NGS9 318 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 HDAC2Q92769 488 aaKnown RBP16.86■□□□□ 0.29
SREBF1-220ENST00000581707 C7orf34Q96L11 122 aa16.86■□□□□ 0.29
SREBF1-220ENST00000581707 CDRT15Q96T59 188 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms