RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PRSS37A4D1T9 235 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 C11orf94C9JXX5 98 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 TMX2-CTNND1H3BSU7 103 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 RNF13O43567 381 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 TROVE2P10155 538 aaKnown RBP eCLIP3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 CCR8P51685 355 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 UCNP55089 124 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 ZNF92Q03936 586 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 ECH1Q13011 328 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 TMEM183BQ1AE95 376 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 TMEM183AQ8IXX5 376 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 ENTHD1Q8IYW4 607 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 MS4A15Q8N5U1 240 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 EID2Q8N6I1 236 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 CEP112Q8N8E3 955 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 Q8N9L7 120 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 DUSP18Q8NEJ0 188 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 OR56B2PQ8NGI1 322 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 OR1S2Q8NGQ3 325 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 MARCH1Q8TCQ1 289 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 GIMAP1Q8WWP7 306 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 SRSF12Q8WXF0 261 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 PLIN2Q99541 437 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 CENPKQ9BS16 269 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 NUP58Q9BVL2 599 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 OSBPL10Q9BXB5 764 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 PLA2G2FQ9BZM2 168 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 CWH43Q9H720 699 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 KIAA1257Q9ULG3 409 aa3.01□□□□□ -1.93
SMCHD1-205ENST00000581383 NACAE9PAV3 2078 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 NFASCO94856 1347 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 HIDE1A8MVS5 230 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 SS18L1O75177 396 aaPredicted RBP3□□□□□ -1.93
SMCHD1-205ENST00000581383 ERLIN1O75477 346 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 ZNF43P17038 809 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 ZNF30P17039 623 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 HOXA9P31269 272 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 CXCL5P42830 114 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 NCBP2P52298 156 aaKnown RBP eCLIP3□□□□□ -1.93
SMCHD1-205ENST00000581383 YWHAGP61981 247 aaKnown RBP eCLIP3□□□□□ -1.93
SMCHD1-205ENST00000581383 PRAMEF20Q5VT98 475 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 SASS6Q6UVJ0 657 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 CCDC73Q6ZRK6 1079 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 TMEM135Q86UB9 458 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 RHEBL1Q8TAI7 183 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 RAB3IL1Q8TBN0 382 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 ACTRT1Q8TDG2 376 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 GPR151Q8TDV0 419 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 CXorf40AQ8TE69 158 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 PIBF1Q8WXW3 757 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 FAM104AQ969W3 186 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 SDHCQ99643 169 aaPredicted RBP3□□□□□ -1.93
SMCHD1-205ENST00000581383 RPF2Q9H7B2 306 aaKnown RBP3□□□□□ -1.93
SMCHD1-205ENST00000581383 TM9SF3Q9HD45 589 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 CNTNAP1P78357 1384 aa3□□□□□ -1.93
SMCHD1-205ENST00000581383 DLGAP1O14490 977 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 KMOO15229 486 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 CD5LO43866 347 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 WBP4O75554 376 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 CLIC3O95833 236 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 IGLV2-23P01705 113 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 PLEKP08567 350 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 ZNF24P17028 368 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 AK4P27144 223 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 CCNHP51946 323 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 ACLYP53396 1101 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 KRTAP10-1P60331 282 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 ACTA2P62736 377 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 ACTG2P63267 376 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 ACTC1P68032 377 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 ACTA1P68133 377 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 HSP90AB3PQ58FF7 597 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 XKR7Q5GH72 579 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 ARMC12Q5T9G4 340 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 AGBL2Q5U5Z8 902 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 SLC8B1Q6J4K2 584 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 Q6P435 159 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 H2AFVQ71UI9 128 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 ZNF786Q8N393 782 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 MREGQ8N565 214 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 KIFAP3Q92845 792 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 CCDC126Q96EE4 140 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 CEP170P1Q96L14 293 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 TSSK3Q96PN8 268 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 TAAR1Q96RJ0 339 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 SH3GL3Q99963 347 aa2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 ILKAPQ9H0C8 392 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 LSM7Q9UK45 103 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-205ENST00000581383 PLAC8L1A1L4L8 177 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 CTAGE15A4D2H0 777 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 SMCO2A6NFE2 343 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 F6UB75 175 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 RAB29O14966 203 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 LSM1O15116 133 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 BGLAPP02818 100 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 ANXA5P08758 320 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 HOXC4P09017 264 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 SMIM10L1P0DMW3 83 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 ADRB3P13945 408 aa2.98□□□□□ -1.93
SMCHD1-205ENST00000581383 FOLR1P15328 257 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms