RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 LGI3Q8N145 548 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 RNF167Q9H6Y7 350 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 TMEM235A6NFC5 223 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 MRPL33O75394 65 aaKnown RBP13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 MT-ND4LP03901 98 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 POU3F3P20264 500 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 BIDP55957 195 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 FAM58AQ8N1B3 248 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 PLPP7Q8NBV4 271 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 DDOQ99489 341 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 NIT2Q9NQR4 276 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 NPFFR2Q9Y5X5 522 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 CCSO14618 274 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 MMP11P24347 488 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 TRHRP34981 398 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 CLDN20P56880 219 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 GDPD3Q7L5L3 318 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 C2CD4CQ8TF44 421 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 RASD2Q96D21 266 aa13.41□□□□□ -0.26
CSNK1D-217ENST00000581241 PRKRAO75569 313 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 LGI1O95970 557 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 GRB2P62993 217 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 GABREP78334 506 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 SLC35A2P78381 396 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 YIPF6Q96EC8 236 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 MAP3K3Q99759 626 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 ZNF629Q9UEG4 869 aaPredicted RBP13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 TOPAZ1Q8N9V7 1692 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 PRPH2P23942 346 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 GLIPR1L1Q6UWM5 242 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 LINC00346Q8IVM7 164 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 PRSS35Q8N3Z0 413 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 FYTTD1Q96QD9 318 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 CDCA3Q99618 268 aaPredicted RBP13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 WDR83Q9BRX9 315 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 ARV1Q9H2C2 271 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 HRH3Q9Y5N1 445 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 ZFP92A6NM28 416 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 HPNP05981 417 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 DUSP1P28562 367 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 SYT14P1Q58G82 188 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 ZNF425Q6IV72 752 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 SLC48A1Q6P1K1 146 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 FAM111BQ6SJ93 734 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 PBX4Q9BYU1 374 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 NKX2-4Q9H2Z4 354 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 NDRG4Q9ULP0 352 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 HOXC8P31273 242 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 MARCH8Q5T0T0 291 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 VRK3Q8IV63 474 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 LMNTD1Q8N9Z9 388 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 OR6K3Q8NGY3 331 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 GSX2Q9BZM3 304 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 PLK3Q9H4B4 646 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 BOKQ9UMX3 212 aaPredicted RBP13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 RGPD2P0DJD1 1756 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 TUBAL3A6NHL2 446 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 H7C1Q1 480 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 SLC6A11P48066 632 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 NPBWR1P48145 328 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 IHHQ14623 411 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 MEP1BQ16820 701 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 LTC4SQ16873 150 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 TMEM31Q5JXX7 168 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 CDH26Q8IXH8 852 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 SLC39A11Q8N1S5 342 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 OR51A4Q8NGJ6 313 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 ST8SIA2Q92186 375 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 UBE2FQ969M7 185 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 C1QTNF3Q9BXJ4 246 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 CDCA4Q9BXL8 241 aa13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 NXT1Q9UKK6 140 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-217ENST00000581241 SLC19A1P41440 591 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 MRPL19P49406 292 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 TAF9Q16594 264 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 ADAMTSL4Q6UY14 1074 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 HSD17B11Q8NBQ5 300 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 OR5D18Q8NGL1 313 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 INTS12Q96CB8 462 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 GPR78Q96P69 363 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 DCLRE1CQ96SD1 692 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 SCPEP1Q9HB40 452 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 TCRBV5S2A0A599 114 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 F6UZH7 168 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 THBS1P07996 1170 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 MFAP5Q13361 173 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 TMEM176BQ3YBM2 270 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 PAQR9Q6ZVX9 377 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 KANSL1Q7Z3B3 1105 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 TMEFF1Q8IYR6 380 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 STACQ99469 402 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 SLC6A17Q9H1V8 727 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 UBQLN3Q9H347 655 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 PPT2Q9UMR5 302 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 STRAPQ9Y3F4 350 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 BTBD17A6NE02 478 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 GFRA2O00451 464 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 TXNDC12O95881 172 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 RAD52P43351 418 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 RNF186Q9NXI6 227 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms