RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 POU4F2Q12837 409 aa9.32□□□□□ -0.92
TOP3A-210ENST00000580713 SELENBP1Q13228 472 aa9.32□□□□□ -0.92
TOP3A-210ENST00000580713 TOMM34Q15785 309 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-210ENST00000580713 NPTX1Q15818 432 aa9.32□□□□□ -0.92
TOP3A-210ENST00000580713 KLHL24Q6TFL4 600 aa9.32□□□□□ -0.92
TOP3A-210ENST00000580713 USP43Q70EL4 1123 aa9.32□□□□□ -0.92
TOP3A-210ENST00000580713 RANBP3LQ86VV4 465 aaPredicted RBP9.32□□□□□ -0.92
TOP3A-210ENST00000580713 ZNF440Q8IYI8 595 aa9.32□□□□□ -0.92
TOP3A-210ENST00000580713 LRRC17Q8N6Y2 441 aa9.32□□□□□ -0.92
TOP3A-210ENST00000580713 MRPL24Q96A35 216 aaKnown RBP9.32□□□□□ -0.92
TOP3A-210ENST00000580713 MCHR1Q99705 422 aa9.32□□□□□ -0.92
TOP3A-210ENST00000580713 REEP1Q9H902 201 aa9.32□□□□□ -0.92
TOP3A-210ENST00000580713 SLC17A5Q9NRA2 495 aa9.32□□□□□ -0.92
TOP3A-210ENST00000580713 HIF1ANQ9NWT6 349 aa9.32□□□□□ -0.92
TOP3A-210ENST00000580713 CARD8Q9Y2G2 431 aa9.32□□□□□ -0.92
TOP3A-210ENST00000580713 SAC3D1A6NKF1 404 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 ZNF264O43296 627 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 OIP5O43482 229 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 BCAS1O75363 584 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-210ENST00000580713 MRPL33O75394 65 aaKnown RBP9.31□□□□□ -0.92
TOP3A-210ENST00000580713 E2F6O75461 281 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 CYP7B1O75881 506 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 PRSS23O95084 383 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 WNT11O96014 354 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 ITGA5P08648 1049 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 OR4A8P0C604 315 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 PEX2P28328 305 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 RRM2P31350 389 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 IFNA8P32881 189 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 PTDSS1P48651 473 aaKnown RBP9.31□□□□□ -0.92
TOP3A-210ENST00000580713 CDH12P55289 794 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 TAS2R41P59536 307 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 HOXC5Q00444 222 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 PLAURQ03405 335 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 OGFRL1Q5TC84 451 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-210ENST00000580713 LPCAT4Q643R3 524 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 HIST2H2BDQ6DRA6 164 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 CBLN3Q6UW01 205 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 TMCO5AQ8N6Q1 288 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 FAM71CQ8NEG0 241 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 NRG4Q8WWG1 115 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 NEU4Q8WWR8 484 aaPredicted RBP9.31□□□□□ -0.92
TOP3A-210ENST00000580713 EME1Q96AY2 570 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 TMEM186Q96B77 213 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 MRGPRX4Q96LA9 322 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 PRRC1Q96M27 445 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 C9orf16Q9BUW7 83 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 POLR2J2Q9GZM3 115 aaKnown RBP9.31□□□□□ -0.92
TOP3A-210ENST00000580713 LAT2Q9GZY6 243 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 POLR2J3Q9H1A7 115 aaKnown RBP9.31□□□□□ -0.92
TOP3A-210ENST00000580713 VCX3BQ9H321 246 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 NARFLQ9H6Q4 476 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 NTN4Q9HB63 628 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 EXOSC3Q9NQT5 275 aaKnown RBP9.31□□□□□ -0.92
TOP3A-210ENST00000580713 CA10Q9NS85 328 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 VNN3Q9NY84 501 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 UPB1Q9UBR1 384 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 TESQ9UGI8 421 aaKnown RBP9.31□□□□□ -0.92
TOP3A-210ENST00000580713 A4GNTQ9UNA3 340 aa9.31□□□□□ -0.92
TOP3A-210ENST00000580713 SAMHD1Q9Y3Z3 626 aaKnown RBP9.31□□□□□ -0.92
TOP3A-210ENST00000580713 CPSF4LA6NMK7 179 aaKnown RBP9.3□□□□□ -0.92
TOP3A-210ENST00000580713 SULT2B1O00204 365 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 TNFRSF11BO00300 401 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 FFAR1O14842 300 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 EIF4E2O60573 245 aaKnown RBP9.3□□□□□ -0.92
TOP3A-210ENST00000580713 TPST2O60704 377 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 FMO6PO60774 539 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 GADD45GO95257 159 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 H1F0P07305 194 aaKnown RBP9.3□□□□□ -0.92
TOP3A-210ENST00000580713 PRG2P13727 222 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 PRKCAP17252 672 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 VHLP40337 213 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 ACAA2P42765 397 aaKnown RBP9.3□□□□□ -0.92
TOP3A-210ENST00000580713 SLC1A3P43003 542 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 DIO1P49895 249 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 PPOXP50336 477 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 CCR4P51679 360 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 ARHGDIAP52565 204 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 SUMO3P55854 103 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-210ENST00000580713 SMIM11AP58511 58 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 PRPS1P60891 318 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 CSNK2A1P68400 391 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-210ENST00000580713 TGFBR3Q03167 851 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 EPS8Q12929 822 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 FOXL1Q12952 345 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 PPP1R8Q12972 351 aaKnown RBP9.3□□□□□ -0.92
TOP3A-210ENST00000580713 SKP2Q13309 424 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 PIN1Q13526 163 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-210ENST00000580713 GK3PQ14409 553 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 LRRC36Q1X8D7 754 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 NDUFAF6Q330K2 333 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 ENTPD8Q5MY95 495 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 C3orf33Q6P1S2 294 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 FAHD2BQ6P2I3 314 aaPredicted RBP9.3□□□□□ -0.92
TOP3A-210ENST00000580713 CASP12Q6UXS9 341 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 OFCC1Q8IZS5 231 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 ZCCHC24Q8N2G6 241 aaKnown RBP9.3□□□□□ -0.92
TOP3A-210ENST00000580713 ZNF786Q8N393 782 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 C17orf78Q8N4C9 275 aa9.3□□□□□ -0.92
TOP3A-210ENST00000580713 PIK3C3Q8NEB9 887 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms