RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 HACD2Q6Y1H2 254 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 WDR88Q6ZMY6 472 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 ZNF813Q6ZN06 617 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 C1orf229Q6ZS94 237 aaPredicted RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 H1FNTQ75WM6 255 aaPredicted RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 NLRC3Q7RTR2 1065 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 SKA3Q8IX90 412 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 C20orf196Q8IYI0 205 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 TMEM123Q8N131 208 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 OR8H2Q8N162 312 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 FITM2Q8N6M3 262 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 C10orf53Q8N6V4 93 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 LRRC17Q8N6Y2 441 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 NKAIN3Q8N8D7 197 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 PCYOX1LQ8NBM8 494 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 MAGEE2Q8TD90 523 aaPredicted RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 STK35Q8TDR2 534 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 OIT3Q8WWZ8 545 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 GTF3AQ92664 365 aaKnown RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 TRIM63Q969Q1 353 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 FAHD2AQ96GK7 314 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 LRGUKQ96M69 825 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 ANKRD27Q96NW4 1050 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 MOGAT1Q96PD6 335 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 SH3GL3Q99963 347 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 HOPXQ9BPY8 73 aaPredicted RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 PAIP1Q9H074 479 aaKnown RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 FAM107BQ9H098 131 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 ZNF442Q9H7R0 627 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 EFCAB1Q9HAE3 211 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 OBP2BQ9NPH6 170 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 ZNF275Q9NSD4 429 aaPredicted RBP3.3□□□□□ -1.88
NUP85-209ENST00000578987 HIF1ANQ9NWT6 349 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 GID8Q9NWU2 228 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 ZNF224Q9NZL3 707 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 CALML5Q9NZT1 146 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 B3GAT1Q9P2W7 334 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 POFUT2Q9Y2G5 429 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 AP3M1Q9Y2T2 418 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 IFT52Q9Y366 437 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 CAPN7Q9Y6W3 813 aa3.3□□□□□ -1.88
NUP85-209ENST00000578987 TRAV36DV7A0A075B6V5 113 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 LOC105371242A0A075B767 164 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 A0A087WUJ7 227 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 TRBV5-3A0A0A0MS03 114 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 TMEM247A6NEH6 219 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 CPSF4LA6NMK7 179 aaKnown RBP3.29□□□□□ -1.88
NUP85-209ENST00000578987 ZNF726A6NNF4 738 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 ZNF99A8MXY4 864 aaPredicted RBP3.29□□□□□ -1.88
NUP85-209ENST00000578987 EVPLLA8MZ36 301 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 B4DSR2 109 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 M0R233 179 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 FBP2O00757 339 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 PLPP3O14495 311 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 AIM2O14862 343 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 ANGPT2O15123 496 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 KCNAB3O43448 404 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 SPRY1O43609 319 aaPredicted RBP3.29□□□□□ -1.88
NUP85-209ENST00000578987 TRAF3IP2O43734 574 aaPredicted RBP3.29□□□□□ -1.88
NUP85-209ENST00000578987 SYNGR3O43761 229 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 OR2T1O43869 369 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 NCR1O76036 304 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 PDE5AO76074 875 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 CH25HO95992 272 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 ADORA3P0DMS8 318 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 GAAP10253 952 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 BMP2P12643 396 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 COX4I1P13073 169 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 HOXB9P17482 250 aaPredicted RBP3.29□□□□□ -1.88
NUP85-209ENST00000578987 EGR1P18146 543 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 ADRA2CP18825 462 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 AQP1P29972 269 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 GLRXP35754 106 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 DVL1P1P54792 670 aaPredicted RBP3.29□□□□□ -1.88
NUP85-209ENST00000578987 CDH12P55289 794 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 BIDP55957 195 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 ERVS71-1P61550 626 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 LMO4P61968 165 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 CCL8P80075 99 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 POU3F1Q03052 451 aaPredicted RBP3.29□□□□□ -1.88
NUP85-209ENST00000578987 SF3A3Q12874 501 aaKnown RBP eCLIP3.29□□□□□ -1.88
NUP85-209ENST00000578987 FADDQ13158 208 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 PMS2P3Q13401 168 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 MELKQ14680 651 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 ODF1Q14990 250 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 TSTQ16762 297 aaKnown RBP3.29□□□□□ -1.88
NUP85-209ENST00000578987 TRMT5Q32P41 509 aaKnown RBP3.29□□□□□ -1.88
NUP85-209ENST00000578987 MMEL1Q495T6 779 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 SPATS1Q496A3 300 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 CCDC92Q53HC0 331 aaPredicted RBP3.29□□□□□ -1.88
NUP85-209ENST00000578987 RUNDC3AQ59EK9 446 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 SPRNQ5BIV9 151 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 ALG10BQ5I7T1 473 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 AVPI1Q5T686 147 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 FAM69AQ5T7M9 428 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 NANOGP8Q6NSW7 305 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 PGM2L1Q6PCE3 622 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 FKBP9P1Q75LS8 142 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 TRPM8Q7Z2W7 1104 aa3.29□□□□□ -1.88
NUP85-209ENST00000578987 PEG10Q86TG7 708 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms