RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 TM9SF4Q92544 642 aa11.68□□□□□ -0.54
CTC1-203ENST00000578240 EXTL1Q92935 676 aa11.68□□□□□ -0.54
CTC1-203ENST00000578240 ZNF385AQ96PM9 386 aaKnown RBP11.68□□□□□ -0.54
CTC1-203ENST00000578240 MARCH7Q9H992 704 aa11.68□□□□□ -0.54
CTC1-203ENST00000578240 ERVK13-1Q9NX77 482 aa11.68□□□□□ -0.54
CTC1-203ENST00000578240 COPS3Q9UNS2 423 aa11.68□□□□□ -0.54
CTC1-203ENST00000578240 RASD1Q9Y272 281 aa11.68□□□□□ -0.54
CTC1-203ENST00000578240 RTTNQ86VV8 2226 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 TMEM129A0AVI4 362 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 IRGMA1A4Y4 181 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 XKRYO14609 159 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 LALBAP00709 142 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 RENP00797 406 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 HCCSP53701 268 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 ZNF85Q03923 595 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 SLC10A1Q14973 349 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 OTPQ5XKR4 325 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 FAM205BPQ63HN1 556 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 TMEM225Q6GV28 225 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 CREB3L2Q70SY1 520 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 ZNF367Q7RTV3 350 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 TIGD4Q8IY51 512 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 ZADH2Q8N4Q0 377 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 ZNF511Q8NB15 262 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 SYT14Q8NB59 555 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 OR6K6Q8NGW6 343 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 ROBO4Q8WZ75 1007 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 RORBQ92753 470 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 ABTB1Q969K4 478 aaPredicted RBP11.67□□□□□ -0.54
CTC1-203ENST00000578240 YIPF6Q96EC8 236 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 OPALINQ96PE5 141 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 TBX5Q99593 518 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 SRA1Q9HD15 236 aaKnown RBP11.67□□□□□ -0.54
CTC1-203ENST00000578240 VCX3AQ9NNX9 186 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 PLSCR2Q9NRY7 297 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 KLHDC2Q9Y2U9 406 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 FKBP7Q9Y680 259 aa11.67□□□□□ -0.54
CTC1-203ENST00000578240 TRGV5A0A0B4J1U4 118 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 SLC35F4A4IF30 521 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 A6NIZ1 184 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 TFECO14948 347 aaPredicted RBP11.66□□□□□ -0.54
CTC1-203ENST00000578240 ZNF432O94892 652 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 PSMB9P28065 219 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 CARD18P57730 90 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 RAP1BP61224 184 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 RAP1AP62834 184 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 HIST3H3Q16695 136 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 LCN1P1Q5VSP4 162 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 LHFPL3Q86UP9 236 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 TMEM123Q8N131 208 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 POMGNT2Q8NAT1 580 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 PROKR2Q8NFJ6 384 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 OR2T4Q8NH00 348 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 FCGR1BQ92637 280 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 CPNE4Q96A23 557 aaPredicted RBP11.66□□□□□ -0.54
CTC1-203ENST00000578240 ABHD17AQ96GS6 310 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 FOXN4Q96NZ1 517 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 CNN2Q99439 309 aaKnown RBP11.66□□□□□ -0.54
CTC1-203ENST00000578240 MND1Q9BWT6 205 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 RACGAP1Q9H0H5 632 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 MRPL22Q9NWU5 206 aaKnown RBP11.66□□□□□ -0.54
CTC1-203ENST00000578240 B9D1Q9UPM9 204 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 TP53TG5Q9Y2B4 290 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 EXOSC1Q9Y3B2 195 aaKnown RBP11.66□□□□□ -0.54
CTC1-203ENST00000578240 FLVCR1Q9Y5Y0 555 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 SHANK1Q9Y566 2161 aa11.66□□□□□ -0.54
CTC1-203ENST00000578240 TVP23AA6NH52 213 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 ZNHIT1O43257 154 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 SLC16A7O60669 478 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 CYTIPO60759 359 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 ACTL6AO96019 429 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 GAAP10253 952 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 ZNF43P17038 809 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 PTGS2P35354 604 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 CLDN17P56750 224 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 SRYQ05066 204 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 CAMK2DQ13557 499 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 PON3Q15166 354 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 SSX1Q16384 188 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 TIGD6Q17RP2 521 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 PHYHD1Q5SRE7 291 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 OR6X1Q8NH79 312 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 RNF128Q8TEB7 428 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 ABHD3Q8WU67 409 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 SLC25A44Q96H78 314 aaPredicted RBP11.65□□□□□ -0.54
CTC1-203ENST00000578240 WDYHV1Q96HA8 205 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 COG8Q96MW5 612 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 BBC3Q96PG8 261 aaPredicted RBP11.65□□□□□ -0.54
CTC1-203ENST00000578240 OR2M2Q96R28 347 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 FUNDC2Q9BWH2 189 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 TTTY10Q9BZA0 68 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 FAM192AQ9GZU8 254 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 WDR76Q9H967 626 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 MOKQ9UQ07 419 aa11.65□□□□□ -0.54
CTC1-203ENST00000578240 A0A1B0GVC2 190 aa11.65□□□□□ -0.55
CTC1-203ENST00000578240 A0A1W2PQL4 384 aaPredicted RBP11.65□□□□□ -0.55
CTC1-203ENST00000578240 MKRN2OSH3BPM6 223 aa11.65□□□□□ -0.55
CTC1-203ENST00000578240 M0R3G1 203 aa11.65□□□□□ -0.55
CTC1-203ENST00000578240 MYL12BO14950 172 aa11.65□□□□□ -0.55
CTC1-203ENST00000578240 ATXN7O15265 892 aaPredicted RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms