RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 HIST1H1CP16403 213 aaKnown RBP15.06■□□□□ 0
NUP88-210ENST00000574867 MPGP29372 298 aa15.06■□□□□ 0
NUP88-210ENST00000574867 SH3BGRP55822 239 aaPredicted RBP15.06■□□□□ 0
NUP88-210ENST00000574867 ROR2Q01974 943 aaKnown RBP15.06■□□□□ 0
NUP88-210ENST00000574867 LGALS3BPQ08380 585 aa15.06■□□□□ 0
NUP88-210ENST00000574867 PTGES3Q15185 160 aaKnown RBP15.06■□□□□ 0
NUP88-210ENST00000574867 THEM4Q5T1C6 240 aa15.06■□□□□ 0
NUP88-210ENST00000574867 IQCF1Q8N6M8 205 aa15.06■□□□□ 0
NUP88-210ENST00000574867 SYT14Q8NB59 555 aa15.06■□□□□ 0
NUP88-210ENST00000574867 RBP7Q96R05 134 aa15.06■□□□□ 0
NUP88-210ENST00000574867 GPR35Q9HC97 309 aa15.06■□□□□ 0
NUP88-210ENST00000574867 CMC2Q9NRP2 79 aa15.06■□□□□ 0
NUP88-210ENST00000574867 VSX1Q9NZR4 365 aaPredicted RBP15.06■□□□□ 0
NUP88-210ENST00000574867 HELZ2Q9BYK8 2649 aaKnown RBP15.06■□□□□ 0
NUP88-210ENST00000574867 RIIAD1A6NNX1 92 aa15.05■□□□□ 0
NUP88-210ENST00000574867 ZAR1LA6NP61 321 aa15.05■□□□□ 0
NUP88-210ENST00000574867 PSMB1P20618 241 aaKnown RBP15.05■□□□□ 0
NUP88-210ENST00000574867 ZNF133P52736 654 aaPredicted RBP15.05■□□□□ 0
NUP88-210ENST00000574867 TGFBR3Q03167 851 aa15.05■□□□□ 0
NUP88-210ENST00000574867 TFF3Q07654 80 aa15.05■□□□□ 0
NUP88-210ENST00000574867 PHYHD1Q5SRE7 291 aa15.05■□□□□ 0
NUP88-210ENST00000574867 SLC35F1Q5T1Q4 408 aa15.05■□□□□ 0
NUP88-210ENST00000574867 NMD3Q96D46 503 aaKnown RBP15.05■□□□□ 0
NUP88-210ENST00000574867 CRLF2Q9HC73 371 aa15.05■□□□□ 0
NUP88-210ENST00000574867 SMPD3Q9NY59 655 aaPredicted RBP15.05■□□□□ 0
NUP88-210ENST00000574867 KLF2Q9Y5W3 355 aaPredicted RBP15.05■□□□□ 0
NUP88-210ENST00000574867 SLC22A23A1A5C7 686 aa15.05■□□□□ -0
NUP88-210ENST00000574867 H7C1C5 153 aa15.05■□□□□ -0
NUP88-210ENST00000574867 RENP00797 406 aa15.05■□□□□ -0
NUP88-210ENST00000574867 ZNF3P17036 446 aa15.05■□□□□ -0
NUP88-210ENST00000574867 IGHV1-2P23083 117 aa15.05■□□□□ -0
NUP88-210ENST00000574867 LCN6P62502 163 aa15.05■□□□□ -0
NUP88-210ENST00000574867 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.05■□□□□ -0
NUP88-210ENST00000574867 C10orf128Q5T292 105 aa15.05■□□□□ -0
NUP88-210ENST00000574867 SLX4IPQ5VYV7 408 aa15.05■□□□□ -0
NUP88-210ENST00000574867 LEG1Q6P5S2 330 aa15.05■□□□□ -0
NUP88-210ENST00000574867 PTCHD4Q6ZW05 846 aa15.05■□□□□ -0
NUP88-210ENST00000574867 LINGO2Q7L985 606 aa15.05■□□□□ -0
NUP88-210ENST00000574867 CXorf67Q86X51 503 aaPredicted RBP15.05■□□□□ -0
NUP88-210ENST00000574867 OR4K13Q8NH42 304 aa15.05■□□□□ -0
NUP88-210ENST00000574867 KISS1RQ969F8 398 aaPredicted RBP15.05■□□□□ -0
NUP88-210ENST00000574867 MCHR2Q969V1 340 aa15.05■□□□□ -0
NUP88-210ENST00000574867 SLC38A2Q96QD8 506 aa15.05■□□□□ -0
NUP88-210ENST00000574867 HDHD5Q9BXW7 423 aa15.05■□□□□ -0
NUP88-210ENST00000574867 VCX3BQ9H321 246 aa15.05■□□□□ -0
NUP88-210ENST00000574867 ITGA5P08648 1049 aa15.04■□□□□ -0
NUP88-210ENST00000574867 QDPRP09417 244 aa15.04■□□□□ -0
NUP88-210ENST00000574867 CDKN2AP42771 156 aaKnown RBP15.04■□□□□ -0
NUP88-210ENST00000574867 SORDQ00796 357 aa15.04■□□□□ -0
NUP88-210ENST00000574867 CEACAM16Q2WEN9 425 aa15.04■□□□□ -0
NUP88-210ENST00000574867 SFRP5Q5T4F7 317 aa15.04■□□□□ -0
NUP88-210ENST00000574867 STAC2Q6ZMT1 411 aa15.04■□□□□ -0
NUP88-210ENST00000574867 ALPK2Q86TB3 2170 aa15.04■□□□□ -0
NUP88-210ENST00000574867 GALNT4Q8N4A0 578 aa15.04■□□□□ -0
NUP88-210ENST00000574867 C1orf162Q8NEQ5 155 aaPredicted RBP15.04■□□□□ -0
NUP88-210ENST00000574867 SDR9C7Q8NEX9 313 aa15.04■□□□□ -0
NUP88-210ENST00000574867 OR52E2Q8NGJ4 325 aa15.04■□□□□ -0
NUP88-210ENST00000574867 NMNAT3Q96T66 252 aa15.04■□□□□ -0
NUP88-210ENST00000574867 SYT4Q9H2B2 425 aa15.04■□□□□ -0
NUP88-210ENST00000574867 GPR52Q9Y2T5 361 aa15.04■□□□□ -0
NUP88-210ENST00000574867 EPHA2P29317 976 aa15.04■□□□□ -0
NUP88-210ENST00000574867 ACSM5Q6NUN0 579 aa15.04■□□□□ -0
NUP88-210ENST00000574867 LRFN4Q6PJG9 635 aa15.04■□□□□ -0
NUP88-210ENST00000574867 DNM1P34Q6PK57 102 aa15.04■□□□□ -0
NUP88-210ENST00000574867 ZNF433Q8N7K0 673 aaPredicted RBP15.04■□□□□ -0
NUP88-210ENST00000574867 PLEKHA8Q96JA3 519 aa15.04■□□□□ -0
NUP88-210ENST00000574867 USB1Q9BQ65 265 aaKnown RBP15.04■□□□□ -0
NUP88-210ENST00000574867 GRIP2Q9C0E4 1043 aa15.04■□□□□ -0
NUP88-210ENST00000574867 OR10A4Q9H209 315 aa15.04■□□□□ -0
NUP88-210ENST00000574867 TOR3AQ9H497 397 aa15.04■□□□□ -0
NUP88-210ENST00000574867 ZNF99A8MXY4 864 aaPredicted RBP15.03■□□□□ -0
NUP88-210ENST00000574867 C16orf97H3BN30 126 aa15.03■□□□□ -0
NUP88-210ENST00000574867 SURF4O15260 269 aa15.03■□□□□ -0
NUP88-210ENST00000574867 DHHO43323 396 aa15.03■□□□□ -0
NUP88-210ENST00000574867 IL32P24001 234 aa15.03■□□□□ -0
NUP88-210ENST00000574867 CRABP1P29762 137 aa15.03■□□□□ -0
NUP88-210ENST00000574867 UGT2B10P36537 528 aa15.03■□□□□ -0
NUP88-210ENST00000574867 PEX19P40855 299 aa15.03■□□□□ -0
NUP88-210ENST00000574867 ZNF84P51523 738 aa15.03■□□□□ -0
NUP88-210ENST00000574867 FMODQ06828 376 aa15.03■□□□□ -0
NUP88-210ENST00000574867 TMEM236Q5W0B7 351 aa15.03■□□□□ -0
NUP88-210ENST00000574867 C12orf73Q69YU5 71 aa15.03■□□□□ -0
NUP88-210ENST00000574867 OR7E24Q6IFN5 339 aa15.03■□□□□ -0
NUP88-210ENST00000574867 NPEPL1Q8NDH3 523 aa15.03■□□□□ -0
NUP88-210ENST00000574867 STEAP2Q8NFT2 490 aa15.03■□□□□ -0
NUP88-210ENST00000574867 HCFC1P51610 2035 aa15.03■□□□□ -0
NUP88-210ENST00000574867 SPTBN1Q01082 2364 aaKnown RBP15.03■□□□□ -0
NUP88-210ENST00000574867 LYZL6O75951 148 aa15.02■□□□□ -0
NUP88-210ENST00000574867 SNAP29O95721 258 aa15.02■□□□□ -0
NUP88-210ENST00000574867 PAICSP22234 425 aaKnown RBP15.02■□□□□ -0
NUP88-210ENST00000574867 FAM27E3Q08E93 113 aa15.02■□□□□ -0
NUP88-210ENST00000574867 ZIK1Q3SY52 487 aaPredicted RBP15.02■□□□□ -0
NUP88-210ENST00000574867 ZNF362Q5T0B9 420 aaPredicted RBP15.02■□□□□ -0
NUP88-210ENST00000574867 SLC25A47Q6Q0C1 308 aa15.02■□□□□ -0
NUP88-210ENST00000574867 C17orf78Q8N4C9 275 aa15.02■□□□□ -0
NUP88-210ENST00000574867 SLC37A3Q8NCC5 494 aa15.02■□□□□ -0
NUP88-210ENST00000574867 BOD1Q96IK1 185 aa15.02■□□□□ -0
NUP88-210ENST00000574867 MBOAT4Q96T53 435 aa15.02■□□□□ -0
NUP88-210ENST00000574867 LRRK2Q5S007 2527 aa15.02■□□□□ -0
NUP88-210ENST00000574867 CIB4A0PJX0 185 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms