RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ZCCHC4Q9H5U6 513 aa12.64□□□□□ -0.39
VPS33B-208ENST00000574755 CACNA1CQ13936 2221 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 IGHV1-45A0A0A0MS14 117 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 IGLV1-36A0A0B4J1U3 117 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 A0A1B0GTH9 108 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 NPIPA5E9PKD4 350 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 ITGA10O75578 1167 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 UMODP07911 640 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 SPARCP09486 303 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 KIR2DL3P43628 341 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 DLX5P56178 289 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 ADAM8P78325 824 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 PLPPR5Q32ZL2 321 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 ZNF57Q68EA5 555 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-208ENST00000574755 MZT2BQ6NZ67 158 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 FAM198BQ6UWH4 519 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 ZNF433Q8N7K0 673 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-208ENST00000574755 ZNF671Q8TAW3 534 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 MRGPRX4Q96LA9 322 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 C5orf34Q96MH7 638 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 KCNJ15Q99712 375 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 FBXO4Q9UKT5 387 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 NPIPA1Q9UND3 350 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 KIF26BQ2KJY2 2108 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 PDCD5O14737 125 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 LYRM1O43325 122 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 LDOC1O95751 146 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-208ENST00000574755 CELA2AP08217 269 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 IFNGR1P15260 489 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 CRABP1P29762 137 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 DAP3P51398 398 aaKnown RBP12.63□□□□□ -0.39
VPS33B-208ENST00000574755 POU3F1Q03052 451 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-208ENST00000574755 GLO1Q04760 184 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 Q499Y3 187 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 TCEAL6Q6IPX3 200 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 ZNF544Q6NX49 715 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 LRRN1Q6UXK5 716 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 ZNF676Q8N7Q3 588 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 OR2G2Q8NGZ5 317 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 TCEAL3Q969E4 200 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 WACQ9BTA9 647 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 COMMD4Q9H0A8 199 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 MRPL22Q9NWU5 206 aaKnown RBP12.63□□□□□ -0.39
VPS33B-208ENST00000574755 SLC39A1Q9NY26 324 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 SLCO1C1Q9NYB5 712 aa12.63□□□□□ -0.39
VPS33B-208ENST00000574755 IGLV3-32A0A0A0MS00 114 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 MEIOCA2RUB1 952 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 ETV2O00321 342 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-208ENST00000574755 KLF7O75840 302 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-208ENST00000574755 IMPDH2P12268 514 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 MAPK3P27361 379 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-208ENST00000574755 SOX2P48431 317 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 MAP2K6P52564 334 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 ZP4Q12836 540 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 SF3A2Q15428 464 aaKnown RBP12.62□□□□□ -0.39
VPS33B-208ENST00000574755 MEP1BQ16820 701 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 ODF4Q2M2E3 257 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 RDH10Q8IZV5 341 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 DTWD2Q8NBA8 298 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 CHAC2Q8WUX2 184 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.62□□□□□ -0.39
VPS33B-208ENST00000574755 TCF7L1Q9HCS4 588 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 CHST11Q9NPF2 352 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 RBFOX1Q9NWB1 397 aaKnown RBP12.62□□□□□ -0.39
VPS33B-208ENST00000574755 NPAP1Q9NZP6 1156 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 FBXL2Q9UKC9 423 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 FREM3P0C091 2139 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 A6NIZ1 184 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 HSPB2A8KAH6 182 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 CCNKO75909 580 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 RAP1BP61224 184 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 RAP1AP62834 184 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 HSPB2Q16082 182 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 HES5Q5TA89 166 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 PRAMEF20Q5VT98 475 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 PYHIN1Q6K0P9 492 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 SLC18B1Q6NT16 456 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 PLET1Q6UQ28 207 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 ASB10Q8WXI3 467 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 ASB17Q8WXJ9 295 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 RFT1Q96AA3 541 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 OR8B4Q96RC9 309 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 THAP7Q9BT49 309 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-208ENST00000574755 POTEKPQ9BYX7 375 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 RNF121Q9H920 327 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 SERINC1Q9NRX5 453 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 SPATA2Q9UM82 520 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 COA3Q9Y2R0 106 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-208ENST00000574755 HS3ST3B1Q9Y662 390 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 EML6Q6ZMW3 1958 aa12.62□□□□□ -0.39
VPS33B-208ENST00000574755 FAM240BA0A1B0GVZ2 78 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 LIPT2A6NK58 231 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 TMEM212A6NML5 194 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 OR4C45A6NMZ5 311 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 IFITM5A6NNB3 132 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 TP53I11O14683 189 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 EFNA2O43921 213 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 DKK1O94907 266 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 GP1BAP07359 652 aa12.61□□□□□ -0.39
VPS33B-208ENST00000574755 COX6A1P12074 109 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms