RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 CHID1Q9BWS9 393 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 KRTAP9-4Q9BYQ2 154 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 SELENOIQ9C0D9 397 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 NAA50Q9GZZ1 169 aaKnown RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 DEFB129Q9H1M3 183 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ADNPQ9H2P0 1102 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 KIR3DX1Q9H7L2 352 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ZNF696Q9H7X3 374 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 SIAEQ9HAT2 523 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 PARVGQ9HBI0 331 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 EML4Q9HC35 981 aaKnown RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 MRM3Q9HC36 420 aaKnown RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 ANKHQ9HCJ1 492 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 CD209Q9NNX6 404 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 VCX3AQ9NNX9 186 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ACP6Q9NPH0 428 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.65□□□□□ -2.15
CHD3-217ENST00000574022 EXD2Q9NVH0 621 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 TREM2Q9NZC2 230 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 DHRS4-AS1Q9P1J3 65 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 DCDC2Q9UHG0 476 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 KIF25Q9UIL4 384 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 GNPTGQ9UJJ9 305 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ZNF229Q9UJW7 825 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ING4Q9UNL4 249 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 RCL1Q9Y2P8 373 aaKnown RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 AK9Q5TCS8 1911 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 SCN5AQ14524 2016 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 JCADQ9P266 1359 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 A0A1B0GW15 77 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 A0A1B0GW55 424 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 A0A1W2PRF3 423 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 A0A1W2PRM7 423 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 A6NIZ1 184 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 SLC22A20A6NK97 555 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 LYRM9A8MSI8 78 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 E7EWF7 191 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 PLPP1O14494 284 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 SCAMP2O15127 329 aaKnown RBP1.64□□□□□ -2.15
CHD3-217ENST00000574022 KBTBD11O94819 623 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 ZNF432O94892 652 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 DUSP14O95147 198 aaKnown RBP1.64□□□□□ -2.15
CHD3-217ENST00000574022 VAPBO95292 243 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 HBE1P02100 147 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 DUX4L2P0CJ85 424 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 DUX4L3P0CJ86 424 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 DUX4L4P0CJ87 422 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 DUX4L5P0CJ88 424 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 DUX4L6P0CJ89 424 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 DUX4L7P0CJ90 424 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 PGAM2P15259 253 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 IGLL1P15814 213 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 ZNF3P17036 446 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 CMA1P23946 247 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 IVDP26440 423 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 RFC3P40938 356 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 AQP2P41181 271 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 RPL34P49207 117 aaKnown RBP1.64□□□□□ -2.15
CHD3-217ENST00000574022 SLC26A2P50443 739 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 CCR8P51685 355 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 UCNP55089 124 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 RAP1BP61224 184 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 ATP6V0D1P61421 351 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 IRX3P78415 501 aaPredicted RBP1.64□□□□□ -2.15
CHD3-217ENST00000574022 TGFBR3Q03167 851 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 LRRC63Q05C16 580 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 BCL2L1Q07817 233 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 CD47Q08722 323 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 TWF1Q12792 350 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 ORC2Q13416 577 aaPredicted RBP1.64□□□□□ -2.15
CHD3-217ENST00000574022 ASAH1Q13510 395 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 GGTLC2Q14390 218 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 TGIF1Q15583 401 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 GABRA6Q16445 453 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 PSG3Q16557 428 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 C2CD6Q53TS8 623 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 OR2B11Q5JQS5 317 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 VAX1Q5SQQ9 334 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 CLEC6AQ6EIG7 209 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 CNIH2Q6PI25 160 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 DUX4L9Q6RFH8 374 aaPredicted RBP1.64□□□□□ -2.15
CHD3-217ENST00000574022 TMIGD1Q6UXZ0 262 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 ZNF546Q86UE3 836 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 C17orf82Q86X59 251 aaPredicted RBP1.64□□□□□ -2.15
CHD3-217ENST00000574022 HIPK1Q86Z02 1210 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 SKA3Q8IX90 412 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 RDH10Q8IZV5 341 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 ABHD12Q8N2K0 398 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 KIF2BQ8N4N8 673 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 NOXO1Q8NFA2 376 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 OR10H4Q8NGA5 316 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 NUBPLQ8TB37 319 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 ITFG1Q8TB96 612 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 AGAP11Q8TF27 550 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 DDI1Q8WTU0 396 aa1.64□□□□□ -2.15
CHD3-217ENST00000574022 CHCHD10Q8WYQ3 142 aaPredicted RBP1.64□□□□□ -2.15
CHD3-217ENST00000574022 NDRG1Q92597 394 aaKnown RBP1.64□□□□□ -2.15
CHD3-217ENST00000574022 TFGQ92734 400 aaPredicted RBP1.64□□□□□ -2.15
CHD3-217ENST00000574022 FRAT1Q92837 279 aaPredicted RBP1.64□□□□□ -2.15
CHD3-217ENST00000574022 MRGPRFQ96AM1 343 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms