RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 CELA3BP08861 270 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 RPL4P36578 427 aaKnown RBP17.99■□□□□ 0.47
CHMP6-204ENST00000572778 ACVR1BP36896 505 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 PTH2RP49190 550 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 ZNF84P51523 738 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 RPL27P61353 136 aaKnown RBP17.99■□□□□ 0.47
CHMP6-204ENST00000572778 MS4A2Q01362 244 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 NAAAQ02083 359 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 FHL1Q13642 323 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 TRIM25Q14258 630 aaKnown RBP17.99■□□□□ 0.47
CHMP6-204ENST00000572778 HIST3H3Q16695 136 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 C3orf36Q3SXR2 165 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 MTX3Q5HYI7 312 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 AGAP6Q5VW22 663 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 SHEQ5VZ18 495 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 FBXL14Q8N1E6 418 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 LRRC75AQ8NAA5 344 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 HDAC2Q92769 488 aaKnown RBP17.99■□□□□ 0.47
CHMP6-204ENST00000572778 CCDC124Q96CT7 223 aaKnown RBP17.99■□□□□ 0.47
CHMP6-204ENST00000572778 THTPAQ9BU02 230 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 KATNB1Q9BVA0 655 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 GSX2Q9BZM3 304 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 SEC61A2Q9H9S3 476 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 AURKCQ9UQB9 309 aa17.99■□□□□ 0.47
CHMP6-204ENST00000572778 RAI1Q7Z5J4 1906 aaPredicted RBP17.98■□□□□ 0.47
CHMP6-204ENST00000572778 IGHMP01871 453 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 RRM2P31350 389 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 CDKN1AP38936 164 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 OMPP47874 163 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 CD47Q08722 323 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 GSG1Q2KHT4 349 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 Q5PR19 223 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 LCN8Q6JVE9 175 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 SKA3Q8IX90 412 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 SLC22A24Q8N4F4 322 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 HTRA1Q92743 480 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 TSPAN32Q96QS1 320 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 TRAF4Q9BUZ4 470 aaPredicted RBP17.98■□□□□ 0.47
CHMP6-204ENST00000572778 NDEL1Q9GZM8 345 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 TMEM38BQ9NVV0 291 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 B3GNT2Q9NY97 397 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 TMCC3Q9ULS5 477 aa17.98■□□□□ 0.47
CHMP6-204ENST00000572778 PRRC2AP48634 2157 aaKnown RBP17.98■□□□□ 0.47
CHMP6-204ENST00000572778 ROS1P08922 2347 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 TCRBV5S2A0A599 114 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 SH3PXD2BA1X283 911 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 ENTPD5O75356 428 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 FARS2O95363 451 aaKnown RBP17.97■□□□□ 0.47
CHMP6-204ENST00000572778 STAMBPO95630 424 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 CD8AP01732 235 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 OR8G3PP0DMU2 310 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 CD99P14209 185 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 TTKP33981 857 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 PTDSS1P48651 473 aaKnown RBP17.97■□□□□ 0.47
CHMP6-204ENST00000572778 ATP5J2P56134 94 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 RAB1AP62820 205 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 ERVK-25P63136 954 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 ZNF544Q6NX49 715 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 YTHDF3Q7Z739 585 aaKnown RBP17.97■□□□□ 0.47
CHMP6-204ENST00000572778 DTX2Q86UW9 622 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 MYPOPQ86VE0 399 aaPredicted RBP17.97■□□□□ 0.47
CHMP6-204ENST00000572778 KRTAP1-3Q8IUG1 177 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 MUC15Q8N387 334 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 LRGUKQ96M69 825 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 KCNK17Q96T54 332 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 FUZQ9BT04 418 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 NOX3Q9HBY0 568 aa17.97■□□□□ 0.47
CHMP6-204ENST00000572778 ZNF701Q9NV72 531 aaPredicted RBP17.97■□□□□ 0.47
CHMP6-204ENST00000572778 A6NIZ1 184 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 GYG2O15488 501 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 OR10H3O60404 316 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 UBL3O95164 117 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 SLC2A10O95528 541 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 RAB36O95755 333 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 PATE4P0C8F1 98 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 NR2C1P13056 603 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 CALCRP30988 508 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 LIMS1P48059 325 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 GIPRP48546 466 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 RAP1BP61224 184 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 RAP1AP62834 184 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 FMODQ06828 376 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 FAM205BPQ63HN1 556 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 ZNF519Q8TB69 540 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 NSMAFQ92636 917 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 ASB9Q96DX5 294 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 TRMT61AQ96FX7 289 aaKnown RBP17.96■□□□□ 0.47
CHMP6-204ENST00000572778 MS4A3Q96HJ5 214 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 RSRC1Q96IZ7 334 aaKnown RBP17.96■□□□□ 0.47
CHMP6-204ENST00000572778 RBP7Q96R05 134 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 SH3GL3Q99963 347 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 ALG12Q9BV10 488 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 CBLN4Q9NTU7 201 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 ZNF224Q9NZL3 707 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 GRHPRQ9UBQ7 328 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 SIGLEC7Q9Y286 467 aa17.96■□□□□ 0.47
CHMP6-204ENST00000572778 UNC119BA6NIH7 251 aa17.95■□□□□ 0.46
CHMP6-204ENST00000572778 OVOL3O00110 214 aa17.95■□□□□ 0.46
CHMP6-204ENST00000572778 PTP4A3O75365 173 aa17.95■□□□□ 0.46
CHMP6-204ENST00000572778 NDUFB2O95178 105 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms