RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SAR1AQ9NR31 198 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 REV1Q9UBZ9 1251 aa15.56■□□□□ 0.08
CHD3-214ENST00000572579 DHHO43323 396 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 OR6A2O95222 327 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 TGFAP01135 160 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 HPXP02790 462 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 F13BP05160 661 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 TSPAN19P0C672 248 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 CCL2P13500 99 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 AQP2P41181 271 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 OR1E2P47887 323 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 EVX1P49640 407 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 RPL18Q07020 188 aaKnown RBP15.55■□□□□ 0.08
CHD3-214ENST00000572579 CYLC2Q14093 348 aaPredicted RBP15.55■□□□□ 0.08
CHD3-214ENST00000572579 KRTAP24-1Q3LI83 254 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 FAM166AQ6J272 317 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 MOSPD2Q8NHP6 518 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 MCHR2Q969V1 340 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 ZNF566Q969W8 418 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 NMD3Q96D46 503 aaKnown RBP15.55■□□□□ 0.08
CHD3-214ENST00000572579 SIKE1Q9BRV8 207 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 RIMS3Q9UJD0 308 aa15.55■□□□□ 0.08
CHD3-214ENST00000572579 IGKV1D-43A0A0B4J1Z2 117 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 VSTM5A8MXK1 200 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 BLOC1S5-TXNDC5H3BN57 136 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 WNT9BO14905 357 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 SYNGR3O43761 229 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 MT-ND1P03886 318 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 FUT1P19526 365 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 MYBPC1Q00872 1141 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 LAPTM4AQ15012 233 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 REP15Q6BDI9 236 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 ZNF540Q8NDQ6 660 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 OR4K5Q8NGD3 323 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 OR8J3Q8NGG0 315 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 C10orf82Q8WW14 230 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 YIPF5Q969M3 257 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 C1orf159Q96HA4 380 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 SNX18Q96RF0 628 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 DENND2DQ9H6A0 471 aaPredicted RBP15.54■□□□□ 0.08
CHD3-214ENST00000572579 DYNLRB1Q9NP97 96 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 LPAR3Q9UBY5 353 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 KCNS2Q9ULS6 477 aa15.54■□□□□ 0.08
CHD3-214ENST00000572579 LOC100653049A0A140TA62 436 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 TRMUO75648 421 aaKnown RBP15.53■□□□□ 0.08
CHD3-214ENST00000572579 KRT34O76011 436 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 NCR1O76036 304 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 OR7A10O76100 309 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 UBL3O95164 117 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 BCL10O95999 233 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 CLPTM1O96005 669 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 OR8G3PP0DMU2 310 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 ERVS71-1P61550 626 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 ARMC4Q5T2S8 1044 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 INTS11Q5TA45 600 aaKnown RBP15.53■□□□□ 0.08
CHD3-214ENST00000572579 SYT14Q8NB59 555 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 SLC26A7Q8TE54 656 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 ASB10Q8WXI3 467 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 TMEM158Q8WZ71 300 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 TSPAN32Q96QS1 320 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 FGFR1OP2Q9NVK5 253 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 FBXO9Q9UK97 447 aaPredicted RBP15.53■□□□□ 0.08
CHD3-214ENST00000572579 UGT2A1Q9Y4X1 527 aa15.53■□□□□ 0.08
CHD3-214ENST00000572579 MRASO14807 208 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 PIP5K1CO60331 668 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 RAB36O95755 333 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 HIST1H2ABP04908 130 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 MMP7P09237 267 aaPredicted RBP15.52■□□□□ 0.08
CHD3-214ENST00000572579 UMPSP11172 480 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 NAT2P11245 290 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 THBS2P35442 1172 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 ZNF133P52736 654 aaPredicted RBP15.52■□□□□ 0.08
CHD3-214ENST00000572579 CR1LQ2VPA4 569 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 COQ5Q5HYK3 327 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 TMEM255AQ5JRV8 349 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 DEF8Q6ZN54 512 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 HIST3H2AQ7L7L0 130 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 SNX32Q86XE0 403 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 CPEB3Q8NE35 698 aaKnown RBP15.52■□□□□ 0.08
CHD3-214ENST00000572579 LIPHQ8WWY8 451 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 HIST1H2ACQ93077 130 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 ECSITQ9BQ95 431 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 REPIN1Q9BWE0 567 aaKnown RBP15.52■□□□□ 0.08
CHD3-214ENST00000572579 RACGAP1Q9H0H5 632 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 ZNF446Q9NWS9 450 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 SNX13Q9Y5W8 968 aa15.52■□□□□ 0.08
CHD3-214ENST00000572579 M0R233 179 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 OR5F1O95221 314 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 IGHG1P01857 330 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 FAM157BP0CG42 384 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 SRD5A1P18405 259 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 CDAP32320 146 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 KDELR2P33947 212 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 ARFIP2P53365 341 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 TAS2R41P59536 307 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 FHL1Q13642 323 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 ALKBH6Q3KRA9 238 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 CYBRD1Q53TN4 286 aa15.51■□□□□ 0.07
CHD3-214ENST00000572579 GKAP1Q5VSY0 366 aaPredicted RBP15.51■□□□□ 0.07
CHD3-214ENST00000572579 NANOGNBQ7Z5D8 188 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms