RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 ASXL3Q9C0F0 2248 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 HEATR5AQ86XA9 2040 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 COL5A1P20908 1838 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 A0A087WZY1 265 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 TRBV5-7A0A0A0MS05 114 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 IGLV1-36A0A0B4J1U3 117 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 TRBV11-1A0A0K0K1C0 115 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 SLC22A23A1A5C7 686 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 HMX3A6NHT5 357 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 PRR32B1ATL7 298 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 PATE3B3GLJ2 98 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 D6RAR5 112 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 DCTN6O00399 190 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 ZNF593O00488 134 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 DVL2O14641 736 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 PDCD5O14737 125 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 CTDSPLO15194 276 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 MAGEB4O15481 346 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 FLRT2O43155 660 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 ARHGEF9O43307 516 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 SULT1B1O43704 296 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 SCO2O43819 266 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 EFNA2O43921 213 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 KLF7O75840 302 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 ZFPL1O95159 310 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 WISP1O95388 367 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 NUDT14O95848 222 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 IGHEP01854 428 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 CFIP05156 583 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 KRT8P05787 483 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 KLK3P07288 261 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 SLC2A2P11168 524 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 EPHA1P21709 976 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 AHCYP23526 432 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 ACP1P24666 158 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 EDNRAP25101 427 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 CFPP27918 469 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 HLA-DMAP28067 261 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 RBMS1P29558 406 aaKnown RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 CRABP1P29762 137 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 PTGDSP41222 190 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 EIF1P41567 113 aaKnown RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 PITPNBP48739 271 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 TMED10P49755 219 aaKnown RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 SCAND1P57086 179 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 OR2B6P58173 313 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 NANOS3P60323 173 aaKnown RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 INSM1Q01101 510 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 DBPQ10586 325 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 SLC17A1Q14916 467 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 SF3A2Q15428 464 aaKnown RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 EXT1Q16394 746 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 HSD17B12Q53GQ0 312 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 TRIM61Q5EBN2 209 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 FAM27D1Q5T7N8 215 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 CDCP2Q5VXM1 449 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 PYHIN1Q6K0P9 492 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 MZT2BQ6NZ67 158 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 DEGS2Q6QHC5 323 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 BAIAP2L2Q6UXY1 529 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 C16orf47Q6ZP98 133 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 SHISA6Q6ZSJ9 500 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 RAB43Q86YS6 212 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 PM20D2Q8IYS1 436 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 DND1Q8IYX4 353 aaKnown RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 Q8N402 240 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 RFLNBQ8N5W9 214 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 FADS6Q8N9I5 356 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 ZBTB8BQ8NAP8 495 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 ADPRHL1Q8NDY3 354 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 C19orf18Q8NEA5 215 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 NLGN4YQ8NFZ3 816 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 OR6K6Q8NGW6 343 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 OR2G2Q8NGZ5 317 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 OTOSQ8NHW6 89 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 SLC22A8Q8TCC7 542 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 ADAMTS14Q8WXS8 1223 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 SLC25A36Q96CQ1 311 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 DDIT4LQ96D03 193 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 LOXL4Q96JB6 756 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 TSSK2Q96PF2 358 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 NEDD4LQ96PU5 975 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 DERL3Q96Q80 235 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 OR8B4Q96RC9 309 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 INTS14Q96SY0 518 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 CDC6Q99741 560 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 CRB3Q9BUF7 120 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 DEFB126Q9BYW3 111 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 C11orf54Q9H0W9 315 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 APMAPQ9HDC9 416 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 ACOXLQ9NUZ1 547 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 RBFOX1Q9NWB1 397 aaKnown RBP4.84□□□□□ -1.63
SF3B3-213ENST00000569687 MED11Q9P086 117 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 FRRS1LQ9P0K9 344 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 KLHL9Q9P2J3 617 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 KLHL13Q9P2N7 655 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 SPATA2Q9UM82 520 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 KLHDC2Q9Y2U9 406 aa4.84□□□□□ -1.63
SF3B3-213ENST00000569687 TP53BP1Q12888 1972 aaPredicted RBP4.84□□□□□ -1.64
SF3B3-213ENST00000569687 KMT2EQ8IZD2 1858 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms