RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	GPR35	Q9HC97	309 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	NDRG3	Q9UGV2	375 aa		13.14	□□□□□ -0.31
KLHDC4-223	ENST00000568499	RELN	P78509	3460 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	NCOA6	Q14686	2063 aa	Predicted RBP	13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PRSS44	E7EML9	344 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	TP53	P04637	393 aa	Predicted RBP	13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	IGFBP1	P08833	259 aa	Predicted RBP	13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	HIST1H1C	P16403	213 aa	Known RBP	13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PAICS	P22234	425 aa	Known RBP	13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	EDNRA	P25101	427 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	CRABP1	P29762	137 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	UGT2B10	P36537	528 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	RUNX1T1	Q06455	604 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	FAM27E3	Q08E93	113 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	HIST3H3	Q16695	136 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	LRRC36	Q1X8D7	754 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	MEST	Q5EB52	335 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SLC35F1	Q5T1Q4	408 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ANKRD34A	Q69YU3	496 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	LEG1	Q6P5S2	330 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	OR52E2	Q8NGJ4	325 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	OR8D4	Q8NGM9	314 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	OR4K13	Q8NH42	304 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	MCHR2	Q969V1	340 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	RDH12	Q96NR8	316 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	OR10A4	Q9H209	315 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SLC25A19	Q9HC21	320 aa		13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.13	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PCNX1	Q96RV3	2341 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SLC22A23	A1A5C7	686 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ZNF99	A8MXY4	864 aa	Predicted RBP	13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	CASQ2	O14958	399 aa	Predicted RBP	13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	DHH	O43323	396 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	MITF	O75030	526 aa	Predicted RBP	13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	LYZL6	O75951	148 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	COX5A	P20674	150 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	IGHV1-2	P23083	117 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	CDK5	Q00535	292 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	NPRL3	Q12980	569 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PTGES3	Q15185	160 aa	Known RBP	13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	CDSN	Q15517	529 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	CEACAM16	Q2WEN9	425 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	C1QTNF12	Q5T7M4	302 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	C9orf135	Q5VTT2	229 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ANKRD16	Q6P6B7	361 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	KLHL24	Q6TFL4	600 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	STAC2	Q6ZMT1	411 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	P2RY8	Q86VZ1	359 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	C17orf78	Q8N4C9	275 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	OR4Q3	Q8NH05	313 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	GABARAPL3	Q9BY60	117 aa		13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	VSX1	Q9NZR4	365 aa	Predicted RBP	13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	INTS1	Q8N201	2190 aa	Known RBP	13.12	□□□□□ -0.31
KLHDC4-223	ENST00000568499	TUBAL3	A6NHL2	446 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499		H7C1C5	153 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	KHDRBS3	O75525	346 aa	Known RBP	13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	FARS2	O95363	451 aa	Known RBP	13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	HOXB1	P14653	301 aa	Predicted RBP	13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	NPR2	P20594	1047 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PAX7	P23759	505 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	PEX2	P28328	305 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	CDKN2A	P42771	156 aa	Known RBP	13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	UBE2N	P61088	152 aa	Known RBP	13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	LCN6	P62502	163 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	TFF3	Q07654	80 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	LGALS3BP	Q08380	585 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SNAPC1	Q16533	368 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	C10orf128	Q5T292	105 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	LPCAT4	Q643R3	524 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	LRFN4	Q6PJG9	635 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	CCDC36	Q8IYA8	594 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	GALNT4	Q8N4A0	578 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	IQCF1	Q8N6M8	205 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ZNF555	Q8NEP9	628 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SDR9C7	Q8NEX9	313 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	HSD17B8	Q92506	261 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	NSMAF	Q92636	917 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	MUCL1	Q96DR8	90 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	NMNAT3	Q96T66	252 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SLC29A1	Q99808	456 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ACTR6	Q9GZN1	396 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SYT4	Q9H2B2	425 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	KCNN2	Q9H2S1	579 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	RERGL	Q9H628	205 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	CMC2	Q9NRP2	79 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SMPD3	Q9NY59	655 aa	Predicted RBP	13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	TVP23B	Q9NYZ1	205 aa		13.11	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ZAR1L	A6NP61	321 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	CASK	O14936	926 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	SLC16A7	O60669	478 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	RAD51D	O75771	328 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ATP6V1G2	O95670	118 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ITGA5	P08648	1049 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	RNF224	P0DH78	156 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	CENPA	P49450	140 aa		13.1	□□□□□ -0.31
KLHDC4-223	ENST00000568499	ZNF133	P52736	654 aa	Predicted RBP	13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms