RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TNFRSF1BP20333 461 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 NPR2P20594 1047 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 NR4A1P22736 598 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 IFNA8P32881 189 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 THBS4P35443 961 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 OR1E2P47887 323 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 PTDSS1P48651 473 aaKnown RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 EVX1P49640 407 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 PDLIM4P50479 330 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 DAP3P51398 398 aaKnown RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 UGT2B15P54855 530 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 CLRN1P58418 232 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 RAB1AP62820 205 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 SELENOWP63302 87 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 VLDLRP98155 873 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 HGFACQ04756 655 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 RPL18Q07020 188 aaKnown RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 PIGFQ07326 219 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 LOXL1Q08397 574 aaPredicted RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 ST3GAL3Q11203 375 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 SNTB2Q13425 540 aaKnown RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 PIN1Q13526 163 aaPredicted RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 DAG1Q14118 895 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 MELKQ14680 651 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 HIST3H3Q16695 136 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 TMEM249Q2WGJ8 235 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 NRN1LQ496H8 165 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 LRRC23Q53EV4 343 aaPredicted RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 CYBRD1Q53TN4 286 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 KRT80Q6KB66 452 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 VHLLQ6RSH7 139 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 DEF8Q6ZN54 512 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 DPPA2Q7Z7J5 298 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 NKAIN4Q8IVV8 208 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 WDFY1Q8IWB7 410 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 SLC22A24Q8N4F4 322 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 POU5F2Q8N7G0 328 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 PFN4Q8NHR9 129 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 TMEM255BQ8WV15 326 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 TMEM239Q8WW34 195 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 LIPHQ8WWY8 451 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 LZICQ8WZA0 190 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 RCN3Q96D15 328 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 SGTBQ96EQ0 304 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 TPD52L3Q96J77 140 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 PRRC1Q96M27 445 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 ZNF75AQ96N20 296 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 TNFRSF13CQ96RJ3 184 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 VRK1Q99986 396 aaPredicted RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 HOPXQ9BPY8 73 aaPredicted RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 PIMREGQ9BSJ6 248 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 RAB1BQ9H0U4 201 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 EFCAB1Q9HAE3 211 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 NOX3Q9HBY0 568 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 TMEM38BQ9NVV0 291 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 ZNF224Q9NZL3 707 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 ARMCX1Q9P291 453 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 STX18Q9P2W9 335 aaKnown RBP4.14□□□□□ -1.75
CLK3-219ENST00000567805 MED31Q9Y3C7 131 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 CMAHPQ9Y471 501 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 SPEF1Q9Y4P9 236 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 ABCA1O95477 2261 aa4.14□□□□□ -1.75
CLK3-219ENST00000567805 NAV3Q8IVL0 2385 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 TMEM129A0AVI4 362 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SLC22A23A1A5C7 686 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 GMNCA6NCL1 334 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 A8MV72 311 aaPredicted RBP4.13□□□□□ -1.75
CLK3-219ENST00000567805 VWC2LB2RUY7 222 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 CXCR6O00574 342 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 NME4O00746 187 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 NDUFAB1O14561 156 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 DHHO43323 396 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 ATP8B1O43520 1251 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SYNGR3O43761 229 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 GPRIN2O60269 458 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 MGRN1O60291 552 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 LY6HO94772 140 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 PTHP01270 115 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 IGHA1P01876 353 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 IFNW1P05000 195 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SERPINA5P05154 406 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 F13BP05160 661 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 QDPRP09417 244 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 OR8G3PP0DMU2 310 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 NR2C1P13056 603 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 ACADSP16219 412 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 USF1P22415 310 aaPredicted RBP4.13□□□□□ -1.75
CLK3-219ENST00000567805 LSP1P33241 339 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 GLRXP35754 106 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 AQP2P41181 271 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 NR4A2P43354 598 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 GIPRP48546 466 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 NUDT2P50583 147 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 ZNF84P51523 738 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 SLC7A2P52569 658 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 ZNF133P52736 654 aaPredicted RBP4.13□□□□□ -1.75
CLK3-219ENST00000567805 RPS23P62266 143 aaKnown RBP4.13□□□□□ -1.75
CLK3-219ENST00000567805 GALK2Q01415 458 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 LIPEQ05469 1076 aa4.13□□□□□ -1.75
CLK3-219ENST00000567805 RUNX1T1Q06455 604 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms