RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	F13B	P05160	661 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	QDPR	P09417	244 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	CSF3	P09919	207 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	OR8G3P	P0DMU2	310 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	B4GALT1	P15291	398 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	ZNF14	P17017	642 aa	Predicted RBP	5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	NPR2	P20594	1047 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	NR4A1	P22736	598 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	AQP2	P41181	271 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	UGT2B15	P54855	530 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	CLRN1	P58418	232 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	RAB1A	P62820	205 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	RPL18	Q07020	188 aa	Known RBP	5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	ST3GAL3	Q11203	375 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	DAG1	Q14118	895 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	LAPTM4A	Q15012	233 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	EFNB3	Q15768	340 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	HIST3H3	Q16695	136 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	VHLL	Q6RSH7	139 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	MYPOP	Q86VE0	399 aa	Predicted RBP	5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	SLC22A24	Q8N4F4	322 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	ZNF525	Q8N782	197 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	PFN4	Q8NHR9	129 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	LIPH	Q8WWY8	451 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	NANOS1	Q8WY41	292 aa	Known RBP	5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	CMTM5	Q96DZ9	223 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	ZNF75A	Q96N20	296 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	VRK1	Q99986	396 aa	Predicted RBP	5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	FNDC11	Q9BVV2	318 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	RAB1B	Q9H0U4	201 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	PLK3	Q9H4B4	646 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	ZNF442	Q9H7R0	627 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	INIP	Q9NRY2	104 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	C20orf141	Q9NUB4	165 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	FBXL3	Q9UKT7	428 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	MED31	Q9Y3C7	131 aa		5.99	□□□□□ -1.45
SF3B3-209	ENST00000567635	TMEM129	A0AVI4	362 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	SH3PXD2B	A1X283	911 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	CENPBD1	B2RD01	187 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	MCIDAS	D6RGH6	385 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	hCG_2039718	K7EN88	272 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	CXCR6	O00574	342 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	NME4	O00746	187 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	TLX2	O43763	284 aa	Predicted RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	CD5L	O43866	347 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	MGRN1	O60291	552 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	TRMU	O75648	421 aa	Known RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	ATP5H	O75947	161 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	LY6H	O94772	140 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	UBL3	O95164	117 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	FARS2	O95363	451 aa	Known RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	RAB36	O95755	333 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	ZNF682	O95780	498 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	IGHG1	P01857	330 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	SERPINA5	P05154	406 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	ERCC1	P07992	297 aa	Predicted RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	TSPAN19	P0C672	248 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	PGA4	P0DJD7	388 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	PGA3	P0DJD8	388 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	IFI30	P13284	250 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	ZNF35	P13682	527 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	ACADS	P16219	412 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	SLC25A16	P16260	332 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	YAP1	P46937	504 aa	Known RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	GIPR	P48546	466 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	PTDSS1	P48651	473 aa	Known RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	EVX1	P49640	407 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	PPOX	P50336	477 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	PDLIM4	P50479	330 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	DAP3	P51398	398 aa	Known RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	ZNF84	P51523	738 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	SLC7A2	P52569	658 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	KRTAP1-1	Q07627	177 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	LOXL1	Q08397	574 aa	Predicted RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	BNIP1	Q12981	228 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	MELK	Q14680	651 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	RAB39A	Q14964	217 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	TRAM2	Q15035	370 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	SNCB	Q16143	134 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	C8orf82	Q6P1X6	216 aa	Predicted RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	TMEM53	Q6P2H8	277 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	HACD2	Q6Y1H2	254 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	FKBP9P1	Q75LS8	142 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	HDDC2	Q7Z4H3	204 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	VTCN1	Q7Z7D3	282 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	DPPA2	Q7Z7J5	298 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	TREML1	Q86YW5	311 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	SKA3	Q8IX90	412 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	CDK20	Q8IZL9	346 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	FITM2	Q8N6M3	262 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	SYT14	Q8NB59	555 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	MOSPD2	Q8NHP6	518 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	FGFBP3	Q8TAT2	258 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	C10orf105	Q8TEF2	133 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	MCHR2	Q969V1	340 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	BPIFA2	Q96DR5	249 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	RSRC1	Q96IZ7	334 aa	Known RBP	5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	PRRC1	Q96M27	445 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	FOXN4	Q96NZ1	517 aa		5.98	□□□□□ -1.45
SF3B3-209	ENST00000567635	SORCS2	Q96PQ0	1159 aa		5.98	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms