RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 LYVE1Q9Y5Y7 322 aa18.87■□□□□ 0.61
NME3-210ENST00000567271 IGHV1-18A0A0C4DH31 117 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 ZNF503-AS2A6NEH8 195 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 TNFRSF11BO00300 401 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 NDUFB2O95178 105 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 CD14P08571 375 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 RAP2AP10114 183 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 CBR1P16152 277 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 RPL4P36578 427 aaKnown RBP18.86■□□□□ 0.61
NME3-210ENST00000567271 IFNGR2P38484 337 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 ERVK-25P63136 954 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 MYBPC1Q00872 1141 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 SPOCK1Q08629 439 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 DEFB113Q30KQ7 82 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 FAM205BPQ63HN1 556 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 ADGRG5Q8IZF4 528 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 ARIH2OSQ8N7S6 290 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 OR4C15Q8NGM1 316 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 ZNF519Q8TB69 540 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 NMD3Q96D46 503 aaKnown RBP18.86■□□□□ 0.61
NME3-210ENST00000567271 SLC38A2Q96QD8 506 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 KCNK17Q96T54 332 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 FOXC2Q99958 501 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 KATNB1Q9BVA0 655 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 NDEL1Q9GZM8 345 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 B3GNT2Q9NY97 397 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 POMPQ9Y244 141 aa18.86■□□□□ 0.61
NME3-210ENST00000567271 A6NIZ1 184 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 IGKV3-15P01624 115 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 FPR3P25089 353 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 CAPZA2P47755 286 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 ART1P52961 327 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 FXYD6P3P58550 94 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 RAP1BP61224 184 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 RAP1AP62834 184 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 FLOT2Q14254 428 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 C3orf36Q3SXR2 165 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 C1orf94Q6P1W5 598 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 SLC22A25Q6T423 547 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 IGFBPL1Q8WX77 278 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 PIGTQ969N2 578 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 FBXW5Q969U6 566 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 CCL19Q99731 98 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 ALG12Q9BV10 488 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 CHID1Q9BWS9 393 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 SMURF2Q9HAU4 748 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 TMEM38BQ9NVV0 291 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 CISD1Q9NZ45 108 aaKnown RBP18.85■□□□□ 0.61
NME3-210ENST00000567271 SLC7A8Q9UHI5 535 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 ADAM18Q9Y3Q7 739 aa18.85■□□□□ 0.61
NME3-210ENST00000567271 DHRS12A0PJE2 317 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 IGLV1-44P01699 117 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 HLA-HP01893 362 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 ARR3P36575 388 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 C10orf128Q5T292 105 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 OR2T5Q6IEZ7 315 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 PGBD2Q6P3X8 592 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 THSD4Q6ZMP0 1018 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 FAM122BQ7Z309 247 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 MDP1Q86V88 176 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 DEPDC4Q8N2C3 294 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 SLC22A24Q8N4F4 322 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 LINC00471Q8N535 108 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 OR2T29Q8NH02 315 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 GNPDA2Q8TDQ7 276 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 CANT1Q8WVQ1 401 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 GPX7Q96SL4 187 aaPredicted RBP18.84■□□□□ 0.61
NME3-210ENST00000567271 CXXC4Q9H2H0 198 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 NRIP3Q9NQ35 241 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 BEX4Q9NWD9 120 aaPredicted RBP18.84■□□□□ 0.61
NME3-210ENST00000567271 ZNF224Q9NZL3 707 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 GRHPRQ9UBQ7 328 aa18.84■□□□□ 0.61
NME3-210ENST00000567271 DSCAMO60469 2012 aa18.83■□□□□ 0.61
NME3-210ENST00000567271 SLC2A10O95528 541 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 DANCRP0C864 163 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 NR2C1P13056 603 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 HOXB6P17509 224 aaKnown RBP18.83■□□□□ 0.6
NME3-210ENST00000567271 GSSP48637 474 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 ZNF84P51523 738 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 CDH11P55287 796 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 FMODQ06828 376 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 CD47Q08722 323 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 NRN1LQ496H8 165 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 THEM4Q5T1C6 240 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 SMARCD3Q6STE5 483 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 SPATA24Q86W54 205 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 SKA3Q8IX90 412 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 CLDN22Q8N7P3 220 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 FNDC8Q8TC99 324 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 SMAP2Q8WU79 429 aaPredicted RBP18.83■□□□□ 0.6
NME3-210ENST00000567271 Q96M85 177 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 RBP7Q96R05 134 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 VNN3Q9NY84 501 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 IL20RAQ9UHF4 553 aa18.83■□□□□ 0.6
NME3-210ENST00000567271 IGKV1D-43A0A0B4J1Z2 117 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 E7EQL1 145 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 ARHGEF9O43307 516 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 ENTPD5O75356 428 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 CECR9P0C854 216 aa18.82■□□□□ 0.6
NME3-210ENST00000567271 OR8G3PP0DMU2 310 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms