RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ORC6Q9Y5N6 252 aa10.13□□□□□ -0.79
KARS-207ENST00000566560 IER3IP1Q9Y5U9 82 aa10.13□□□□□ -0.79
KARS-207ENST00000566560 HCFC1P51610 2035 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 ANKHD1Q8IWZ3 2542 aaKnown RBP10.12□□□□□ -0.79
KARS-207ENST00000566560 DOPEY2Q9Y3R5 2298 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 WIPF3A6NGB9 483 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 ZNF587BE7ETH6 402 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 H7C1C5 153 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 M0R3G1 203 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 BHLHE40O14503 412 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 ARPC3O15145 178 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 UPK3AO75631 287 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 TRMUO75648 421 aaKnown RBP10.12□□□□□ -0.79
KARS-207ENST00000566560 ALPLP05186 524 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 NR2C1P13056 603 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 ACADSP16219 412 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 CDH2P19022 906 aaPredicted RBP10.12□□□□□ -0.79
KARS-207ENST00000566560 LCN6P62502 163 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 RUNX1T1Q06455 604 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 CD47Q08722 323 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 FAPQ12884 760 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 LRRC36Q1X8D7 754 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 FBXL19-AS1Q494R0 122 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 SLC27A4Q6P1M0 643 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 ZBTB49Q6ZSB9 765 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 ABHD12BQ7Z5M8 362 aaPredicted RBP10.12□□□□□ -0.79
KARS-207ENST00000566560 ADCK1Q86TW2 530 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 JAZF1Q86VZ6 243 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 C20orf196Q8IYI0 205 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 GABRG1Q8N1C3 465 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 SYT14Q8NB59 555 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 OR4Q3Q8NH05 313 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 HDAC2Q92769 488 aaKnown RBP10.12□□□□□ -0.79
KARS-207ENST00000566560 RNASE6Q93091 150 aaKnown RBP10.12□□□□□ -0.79
KARS-207ENST00000566560 GABARAPL3Q9BY60 117 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 ULBP2Q9BZM5 246 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 LINC00470Q9BZP3 86 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 RIBC2Q9H4K1 309 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 NKX1-2Q9UD57 310 aaPredicted RBP10.12□□□□□ -0.79
KARS-207ENST00000566560 FOXD3Q9UJU5 478 aaPredicted RBP10.12□□□□□ -0.79
KARS-207ENST00000566560 BAIAP2Q9UQB8 552 aa10.12□□□□□ -0.79
KARS-207ENST00000566560 CENPBD1B2RD01 187 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 IMPA2O14732 288 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 CASQ2O14958 399 aaPredicted RBP10.11□□□□□ -0.79
KARS-207ENST00000566560 ARHGEF9O43307 516 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 MGRN1O60291 552 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 ATP6V1G2O95670 118 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 TXNDC12O95881 172 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 COX5AP20674 150 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 CCKARP32238 428 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 CD79BP40259 229 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 CRISP1P54107 249 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 RAD23AP54725 363 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 ESRRGP62508 458 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 ROR2Q01974 943 aaKnown RBP10.11□□□□□ -0.79
KARS-207ENST00000566560 SLC34A1Q06495 639 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 FMODQ06828 376 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 TFF3Q07654 80 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 ITGADQ13349 1161 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 PHYHD1Q5SRE7 291 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 SLC35F1Q5T1Q4 408 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 C9orf135Q5VTT2 229 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 LPCAT4Q643R3 524 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 LINGO2Q7L985 606 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 CXorf67Q86X51 503 aaPredicted RBP10.11□□□□□ -0.79
KARS-207ENST00000566560 LNX2Q8N448 690 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 SDR9C7Q8NEX9 313 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 OR4K13Q8NH42 304 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 TMEM54Q969K7 222 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 LRR1Q96L50 414 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 ALG12Q9BV10 488 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 SLC25A19Q9HC21 320 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 CRLF2Q9HC73 371 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 C8orf4Q9NR00 106 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 ELOVL5Q9NYP7 299 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 TAS2R16Q9NYV7 291 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 GLTPQ9NZD2 209 aa10.11□□□□□ -0.79
KARS-207ENST00000566560 GCN1Q92616 2671 aaKnown RBP10.11□□□□□ -0.79
KARS-207ENST00000566560 PRSS37A4D1T9 235 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 RIIAD1A6NNX1 92 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 IDH3BO43837 385 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 RAD51DO75771 328 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 LYZL6O75951 148 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 SLC2A10O95528 541 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 IFNGP01579 166 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 ITGA5P08648 1049 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 FAM157BP0CG42 384 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 HIST1H1CP16403 213 aaKnown RBP10.1□□□□□ -0.79
KARS-207ENST00000566560 ZNF3P17036 446 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 IGHV1-2P23083 117 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 IL32P24001 234 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 MPGP29372 298 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 GRK5P34947 590 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 MYBPC1Q00872 1141 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.1□□□□□ -0.79
KARS-207ENST00000566560 RIPK1Q13546 671 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 GINS1Q14691 196 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 P2RY6Q15077 328 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 CEACAM16Q2WEN9 425 aa10.1□□□□□ -0.79
KARS-207ENST00000566560 OGFRL1Q5TC84 451 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms