RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 ASCL5Q7RTU5 278 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 SFTPA1Q8IWL2 248 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 ISOC1Q96CN7 298 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 CMKLR1Q99788 373 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 DCUN1D5Q9BTE7 237 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 PLA2G2FQ9BZM2 168 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 ING2Q9H160 280 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 OR2S2Q9NQN1 319 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 INPP5EQ9NRR6 644 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 VNN3Q9NY84 501 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 VPS29Q9UBQ0 182 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 TSPAN11A1L157 253 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 NME2P1O60361 137 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 GMDSO60547 372 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 OR2F2O95006 317 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 DIRAS1O95057 198 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 LAMP1P11279 417 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 ITGADQ13349 1161 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 HNF4GQ14541 408 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 ZBED5Q49AG3 693 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 AWAT1Q58HT5 328 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 SLC5A8Q8N695 610 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 C1orf52Q8N6N3 182 aaKnown RBP9.53□□□□□ -0.88
UBFD1-205ENST00000566136 STXBP6Q8NFX7 210 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 RAD51AP1Q96B01 352 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 CREB3L1Q96BA8 519 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 SLC38A2Q96QD8 506 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 TEX101Q9BY14 249 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 NAA50Q9GZZ1 169 aaKnown RBP9.53□□□□□ -0.88
UBFD1-205ENST00000566136 CA5BQ9Y2D0 317 aa9.53□□□□□ -0.88
UBFD1-205ENST00000566136 LRRK1Q38SD2 2015 aa9.52□□□□□ -0.88
UBFD1-205ENST00000566136 FAM186AA6NE01 2351 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 SLC5A10A0PJK1 596 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 ANTXRLA6NF34 631 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 TMEM200CA6NKL6 621 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 CLIC1O00299 241 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 FGF19O95750 216 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 IFNA14P01570 189 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 CATP04040 527 aaKnown RBP9.52□□□□□ -0.89
UBFD1-205ENST00000566136 CISD3P0C7P0 127 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 PMCHP20382 165 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 PRPS1L1P21108 318 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 DCTP40126 519 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 ACTR1BP42025 376 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 PRLHRP49683 370 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 PSG6Q00889 435 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 USF2Q15853 346 aaPredicted RBP9.52□□□□□ -0.89
UBFD1-205ENST00000566136 DUOXA1Q1HG43 343 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 PARGQ86W56 976 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 OR5D18Q8NGL1 313 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 C12orf43Q96C57 262 aaKnown RBP9.52□□□□□ -0.89
UBFD1-205ENST00000566136 LGALS12Q96DT0 336 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 PYURFQ96I23 114 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 FAM46AQ96IP4 442 aaKnown RBP9.52□□□□□ -0.89
UBFD1-205ENST00000566136 FOXN4Q96NZ1 517 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 SAV1Q9H4B6 383 aaPredicted RBP9.52□□□□□ -0.89
UBFD1-205ENST00000566136 CXorf21Q9HAI6 301 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 MRPS30Q9NP92 439 aaKnown RBP9.52□□□□□ -0.89
UBFD1-205ENST00000566136 MYEF2Q9P2K5 600 aaKnown RBP9.52□□□□□ -0.89
UBFD1-205ENST00000566136 SPATA2Q9UM82 520 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 ABCG2Q9UNQ0 655 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 SATB2Q9UPW6 733 aa9.52□□□□□ -0.89
UBFD1-205ENST00000566136 A0A0G2JK05 382 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 UBE2QL1A1L167 161 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 EVPLLA8MZ36 301 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 hCG_2039718K7EN88 272 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 LATO43561 262 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 VSIG10L2P0DP72 767 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 PSKH1P11801 424 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 BMP7P18075 431 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 NBL1P41271 181 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 REEP5Q00765 189 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 TSC22D1Q15714 1073 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 GABRA6Q16445 453 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 TNXAQ16473 311 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 SYPL1Q16563 259 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 TRAPPC5Q8IUR0 188 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 FAM89BQ8N5H3 189 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 ZNF557Q8N988 423 aaPredicted RBP9.51□□□□□ -0.89
UBFD1-205ENST00000566136 OR5T1Q8NG75 326 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 NEIL2Q969S2 332 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 SIRT7Q9NRC8 400 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 MRPL39Q9NYK5 338 aaKnown RBP9.51□□□□□ -0.89
UBFD1-205ENST00000566136 FAF1Q9UNN5 650 aaPredicted RBP9.51□□□□□ -0.89
UBFD1-205ENST00000566136 CACNA1IQ9P0X4 2223 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 PCM1Q15154 2024 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 PROB1E7EW31 1015 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 SAP18O00422 153 aaKnown RBP9.51□□□□□ -0.89
UBFD1-205ENST00000566136 SOD1P00441 154 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 EPHA2P29317 976 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 RPS13P62277 151 aaKnown RBP9.51□□□□□ -0.89
UBFD1-205ENST00000566136 C6orf226Q5I0X4 101 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 ADGRE4PQ86SQ3 457 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 ERI1Q8IV48 349 aaKnown RBP9.51□□□□□ -0.89
UBFD1-205ENST00000566136 CMTM4Q8IZR5 234 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 C8orf59Q8N0T1 100 aaPredicted RBP9.51□□□□□ -0.89
UBFD1-205ENST00000566136 EID3Q8N140 333 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 OR5K1Q8NHB7 308 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 ADAMTS16Q8TE57 1224 aa9.51□□□□□ -0.89
UBFD1-205ENST00000566136 SLC38A4Q969I6 547 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms