RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 AKR7A3O95154 331 aa12.54□□□□□ -0.4
CX3CL1-204ENST00000565912 EXT1Q16394 746 aa12.54□□□□□ -0.4
CX3CL1-204ENST00000565912 LRRC26Q2I0M4 334 aa12.54□□□□□ -0.4
CX3CL1-204ENST00000565912 PHLDA2Q53GA4 152 aa12.54□□□□□ -0.4
CX3CL1-204ENST00000565912 SLC48A1Q6P1K1 146 aa12.54□□□□□ -0.4
CX3CL1-204ENST00000565912 FAM199XQ6PEV8 388 aaPredicted RBP12.54□□□□□ -0.4
CX3CL1-204ENST00000565912 SVBPQ8N300 66 aa12.54□□□□□ -0.4
CX3CL1-204ENST00000565912 KCTD12Q96CX2 325 aaKnown RBP12.54□□□□□ -0.4
CX3CL1-204ENST00000565912 COL16A1Q07092 1604 aaPredicted RBP12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 DEGS1O15121 323 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 HBE1P02100 147 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 FOLR1P15328 257 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 PPP3CBP16298 524 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 GLYATL3Q5SZD4 288 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 C1orf140Q5VVS0 124 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 CPEB2Q7Z5Q1 589 aaKnown RBP12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 BCDIN3DQ7Z5W3 292 aaKnown RBP12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 LILRA3Q8N6C8 439 aaPredicted RBP12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 PLPP7Q8NBV4 271 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 NAA50Q9GZZ1 169 aaKnown RBP12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 NIPAL2Q9H841 368 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 LRIT2A6NDA9 550 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 OR8U8P0C7N1 319 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 AADACP22760 399 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 CD27P26842 260 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 RAB5CP51148 216 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 UBE2G2P60604 165 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 SIRT6Q8N6T7 355 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 SLC30A7Q8NEW0 376 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 ZBP1Q9H171 429 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 FAM53CQ9NYF3 392 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 F6UZH7 168 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 NRG2O14511 850 aaPredicted RBP12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 HS3ST1O14792 307 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 ELAVL4P26378 380 aaKnown RBP12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 MAGEB1P43366 347 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 GPR85P60893 370 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 CSNK1G2P78368 415 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 GLIPR1L1Q6UWM5 242 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 GJC3Q8NFK1 279 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 EGLN1Q9GZT9 426 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 SELENOFO60613 162 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 GALEQ14376 348 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 NAXDQ8IW45 347 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 L3MBTL4Q8NA19 623 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 PDXPQ96GD0 296 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 WASH6PQ9NQA3 447 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 MYO10Q9HD67 2058 aa12.53□□□□□ -0.4
CX3CL1-204ENST00000565912 AQP7O14520 342 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 TRAF3IP2O43734 574 aaPredicted RBP12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 NAGAP17050 411 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 PRKACAP17612 351 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 MAP2K6P52564 334 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 HNRNPFP52597 415 aaKnown RBP12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 FAPQ12884 760 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 TMEM41BQ5BJD5 291 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 HENMT1Q5T8I9 393 aaKnown RBP12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 STEAP1BQ6NZ63 245 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 ABHD17CQ6PCB6 329 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 GCNT2Q8N0V5 402 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 ZNF583Q96ND8 569 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 A4GALTQ9NPC4 353 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 NECAP2Q9NVZ3 263 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 CD14P08571 375 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 TRNP1Q6NT89 227 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 C6orf15Q6UXA7 325 aaPredicted RBP12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 RPS19BP1Q86WX3 136 aaKnown RBP12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 RHOXF1Q8NHV9 184 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 UBTD2Q8WUN7 234 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 GATA6Q92908 595 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 TIMD4Q96H15 378 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 KIRREL1Q96J84 757 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 DEFB127Q9H1M4 99 aa12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 GMPR2Q9P2T1 348 aaKnown RBP12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 COA3Q9Y2R0 106 aaPredicted RBP12.52□□□□□ -0.4
CX3CL1-204ENST00000565912 HTR1FP30939 366 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 NRARPQ7Z6K4 114 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 RETREG3Q86VR2 466 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 CCDC71Q8IV32 467 aaPredicted RBP12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 CHTF18Q8WVB6 975 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 FAM3DQ96BQ1 224 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 NEURL3Q96EH8 262 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 OPA3Q9H6K4 179 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 MUTYHQ9UIF7 546 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 GPR55Q9Y2T6 319 aaPredicted RBP12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 HS3ST3A1Q9Y663 406 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 MYH11P35749 1972 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 BTBD17A6NE02 478 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 MTNR1BP49286 362 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 TPMTP51580 245 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 LIM2P55344 173 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 IAH1Q2TAA2 248 aaPredicted RBP12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 CCSMST1Q4G0I0 132 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 TMEM52BQ4KMG9 183 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 MFSD12Q6NUT3 480 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 ALKAL1Q6UXT8 129 aa12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 H1FNTQ75WM6 255 aaPredicted RBP12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 YRDCQ86U90 279 aaKnown RBP12.52□□□□□ -0.41
CX3CL1-204ENST00000565912 OR1E3Q8WZA6 343 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms