RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 FAM171A2A8MVW0 826 aa16.66■□□□□ 0.26
COMMD4-213ENST00000565834 CTLA4P16410 223 aa16.66■□□□□ 0.26
COMMD4-213ENST00000565834 RPL5P46777 297 aaKnown RBP16.66■□□□□ 0.26
COMMD4-213ENST00000565834 GGTLC2Q14390 218 aa16.66■□□□□ 0.26
COMMD4-213ENST00000565834 NEDD8Q15843 81 aa16.66■□□□□ 0.26
COMMD4-213ENST00000565834 LINC01590Q5TEZ4 76 aa16.66■□□□□ 0.26
COMMD4-213ENST00000565834 TEX19Q8NA77 164 aa16.66■□□□□ 0.26
COMMD4-213ENST00000565834 POMGNT2Q8NAT1 580 aa16.66■□□□□ 0.26
COMMD4-213ENST00000565834 CNN2Q99439 309 aaKnown RBP16.66■□□□□ 0.26
COMMD4-213ENST00000565834 CDCA4Q9BXL8 241 aa16.66■□□□□ 0.26
COMMD4-213ENST00000565834 ADGRL4Q9HBW9 690 aa16.66■□□□□ 0.26
COMMD4-213ENST00000565834 B9D1Q9UPM9 204 aa16.66■□□□□ 0.26
COMMD4-213ENST00000565834 ZNF175Q9Y473 711 aa16.66■□□□□ 0.26
COMMD4-213ENST00000565834 PCDHGB1Q9Y5G3 927 aa16.66■□□□□ 0.26
COMMD4-213ENST00000565834 IGKV3D-15A0A087WSY6 115 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 CENPBD1B2RD01 187 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 GPR171O14626 319 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 AQP8O94778 261 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 ADRA2AP08913 450 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 MRPL3P09001 348 aaKnown RBP16.65■□□□□ 0.26
COMMD4-213ENST00000565834 MAP2K4P45985 399 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 EMX1Q04741 257 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-213ENST00000565834 FMODQ06828 376 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 RNPS1Q15287 305 aaKnown RBP16.65■□□□□ 0.26
COMMD4-213ENST00000565834 KRTCAP3Q53RY4 240 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 THEM4Q5T1C6 240 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 PLXDC2Q6UX71 529 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 FNDC8Q8TC99 324 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 ZNF775Q96BV0 537 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-213ENST00000565834 OR2M2Q96R28 347 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 RACGAP1Q9H0H5 632 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 TAS2R16Q9NYV7 291 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 EMC3Q9P0I2 261 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 ZMIZ1Q9ULJ6 1067 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 RCE1Q9Y256 329 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 ACACBO00763 2458 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 TPRP12270 2363 aaKnown RBP16.65■□□□□ 0.26
COMMD4-213ENST00000565834 IGLV1-36A0A0B4J1U3 117 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 SLC22A20A6NK97 555 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 SBK2P0C263 348 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 FCGR2AP12318 317 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 NR2C1P13056 603 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 MYL12AP19105 171 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 PCMT1P22061 227 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 IRF3Q14653 427 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 TBCEQ15813 527 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-213ENST00000565834 MCEMP1Q8IX19 187 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 TMEM123Q8N131 208 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 CISD2Q8N5K1 135 aaKnown RBP16.65■□□□□ 0.26
COMMD4-213ENST00000565834 ACOT13Q9NPJ3 140 aa16.65■□□□□ 0.26
COMMD4-213ENST00000565834 CHCHD3Q9NX63 227 aaKnown RBP16.65■□□□□ 0.26
COMMD4-213ENST00000565834 ING1Q9UK53 422 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-213ENST00000565834 EXOSC1Q9Y3B2 195 aaKnown RBP16.65■□□□□ 0.26
COMMD4-213ENST00000565834 ZNHIT1O43257 154 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 KHDRBS3O75525 346 aaKnown RBP16.64■□□□□ 0.25
COMMD4-213ENST00000565834 ZNF432O94892 652 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 IGHA1P01876 353 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 NAA10P41227 235 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-213ENST00000565834 CSNK1A1P48729 337 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 CENPAP49450 140 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 SELENOPP49908 381 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 BLVRAP53004 296 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 RNLSQ5VYX0 342 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 ZNF324BQ6AW86 544 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-213ENST00000565834 XAF1Q6GPH4 301 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 AAED1Q7RTV5 226 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 ZNF511Q8NB15 262 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 OR5M9Q8NGP3 310 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 OR6N1Q8NGY5 312 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 NMD3Q96D46 503 aaKnown RBP16.64■□□□□ 0.25
COMMD4-213ENST00000565834 ERGIC3Q9Y282 383 aa16.64■□□□□ 0.25
COMMD4-213ENST00000565834 J3QRE1 110 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 GLO1Q04760 184 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 ETFDHQ16134 617 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 HIST3H3Q16695 136 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 LYPD4Q6UWN0 246 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 ADGRE4PQ86SQ3 457 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 OR10H4Q8NGA5 316 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 FAR1Q8WVX9 515 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 TMEM45BQ96B21 275 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 JAM3Q9BX67 310 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 SLC25A18Q9H1K4 315 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 RNF122Q9H9V4 155 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 GLTPQ9NZD2 209 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 COA3Q9Y2R0 106 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-213ENST00000565834 PKD1L2Q7Z442 2459 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 MED12LQ86YW9 2145 aa16.63■□□□□ 0.25
COMMD4-213ENST00000565834 IGKV1D-43A0A0B4J1Z2 117 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 TVP23AA6NH52 213 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 ZNF724A8MTY0 619 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 C12orf71A8MTZ7 269 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 SELENOFO60613 162 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 SLC43A1O75387 559 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 TGM6O95932 706 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 HLA-DQA2P01906 255 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 JUNBP17275 347 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-213ENST00000565834 ALDH3B2P48448 385 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 ETV1P50549 477 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 KLRB1Q12918 225 aa16.62■□□□□ 0.25
COMMD4-213ENST00000565834 C19orf48Q6RUI8 117 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms